RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KHDRBS2Q5VWX1 349 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR4C11Q6IEV9 310 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 BIVMQ86UB2 503 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 GPR180Q86V85 440 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZBED8Q8IZ13 594 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ST13P4Q8IZP2 240 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PDPRQ8NCN5 879 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF473Q8WTR7 871 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RIT1Q92963 219 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RGMAQ96B86 450 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MBD6Q96DN6 1003 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TRIB1Q96RU8 372 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SH3GL2Q99962 352 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 WDR83Q9BRX9 315 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CD244Q9BZW8 370 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TRIM31Q9BZY9 425 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 WWTR1Q9GZV5 400 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SH2D2AQ9NP31 389 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OPTCQ9UBM4 332 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ADGRE2Q9UHX3 823 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CHCHD2Q9Y6H1 151 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 C2orf92A0A1B0GVN3 265 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZSCAN12O43309 604 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SEC31AO94979 1220 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CD1DP15813 335 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TCP1P17987 556 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TIMP3P35625 211 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ADAM8P78325 824 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 IGLV3-21P80748 117 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RCAN2Q14206 197 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR4D1Q15615 310 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NTRK2Q16620 822 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FBXL19-AS1Q494R0 122 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CYP20A1Q6UW02 462 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RAPH1Q70E73 1250 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 UBE3DQ7Z6J8 389 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR51B5Q9H339 312 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SNX15Q9NRS6 342 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LYARQ9NX58 379 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MTO1Q9Y2Z2 717 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 K7EPI3 171 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 HRKO00198 91 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PRAMEF4O60810 478 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ERN1O75460 977 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SNX4O95219 450 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 GOSR1O95249 250 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NR2F6P10588 404 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EPXP11678 715 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EPB42P16452 691 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 IVDP26440 423 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OPRM1P35372 400 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CPA2P48052 419 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 WNT3P56703 355 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SORDQ00796 357 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CRYZQ08257 329 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SLMAPQ14BN4 828 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DAZAP2Q15038 168 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EBPQ15125 230 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.59e-7■■■■□ 20.5
TNFRSF1A-207ENST00000535958 DEPDC1Q5TB30 811 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PRAMEF9Q5VWM5 478 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ADGRD1Q6QNK2 874 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SEM1Q6ZVN7 128 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TBC1D1Q86TI0 1168 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LAS2Q8IYD9 372 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NAXEQ8NCW5 288 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR7G3Q8NG95 312 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 STAG3L4Q8TBR4 150 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PYROXD1Q8WU10 500 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 REPS1Q96D71 796 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RILPQ96NA2 401 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CPNE1Q99829 537 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SORBS1Q9BX66 1292 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MOCS1Q9NZB8 636 aa11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PTBP2Q9UKA9 531 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CNOT11Q9UKZ1 510 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ANKRD33BA6NCL7 494 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CLCA1A8K7I4 914 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ATE1O95260 518 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GPR75O95800 540 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C1QAP02745 245 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CASP2P42575 452 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CDK9P50750 372 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SLC37A1P57057 533 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 RAB10P61026 200 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms