RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 AGO3Q9H9G7 860 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 FOLH1BQ9HBA9 442 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SLC2A6Q9UGQ3 507 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PCTPQ9UKL6 214 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PADI3Q9ULW8 664 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SSR3Q9UNL2 185 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SAMHD1Q9Y3Z3 626 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 ASB4Q9Y574 426 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PDCD11Q14690 1871 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 A0A0U1RQF3 1178 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 IQCMA0A1B0GVH7 501 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 LINC00862A6NCI5 91 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TUBAL3A6NHL2 446 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 LRRC14BA6NHZ5 514 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 BTN3A1O00481 513 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 DSCR3O14972 297 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 GRM6O15303 877 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 KIAA0513O60268 411 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ECI2O75521 394 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 STC2O76061 302 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 RECQL4O94761 1208 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SEMA3DO95025 777 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SIX3O95343 332 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 GOT2P00505 430 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 IFNA7P01567 189 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 PSKH1P11801 424 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 CKMT1AP12532 417 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SLC2A4P14672 509 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TYRP14679 529 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 CD6P30203 668 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 CD52P31358 61 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TNFSF8P32971 234 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 S100A3P33764 101 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SDC2P34741 201 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 LIPAP38571 399 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ZFP36L2P47974 494 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 TTPAP49638 278 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 STC1P52823 247 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ACVR1Q04771 509 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 OR4D1Q15615 310 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 COL28A1Q2UY09 1125 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FLYWCH1Q4VC44 716 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 HSD17B12Q53GQ0 312 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 PYCR3Q53H96 274 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 XKR4Q5GH76 650 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 C10orf62Q5T681 223 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 DDI2Q5TDH0 399 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MARC1Q5VT66 337 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MEDAGQ5VYS4 303 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TCTN3Q6NUS6 607 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MZT2AQ6P582 158 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FAHD1Q6P587 224 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FAM171BQ6P995 826 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FAM131AQ6UXB0 335 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SLC24A5Q71RS6 500 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 LIMS2Q7Z4I7 341 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 AMIGO1Q86WK6 493 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 STK40Q8N2I9 435 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TMEM86AQ8N2M4 240 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 CLDN22Q8N7P3 220 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 SGCDQ92629 289 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 RHBDF1Q96CC6 855 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ZC3HAV1LQ96H79 300 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 RNF170Q96K19 258 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ZNF668Q96K58 619 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ZNF578Q96N58 590 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 SIGLEC11Q96RL6 698 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MAPKAP1Q9BPZ7 522 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 C17orf62Q9BQA9 187 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 ENKD1Q9H0I2 346 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 NT5DC2Q9H857 520 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 TRIM45Q9H8W5 580 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 GOLGA2P5Q9HBQ8 144 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 WDR6Q9NNW5 1121 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 SIDT1Q9NXL6 827 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 GLTPQ9NZD2 209 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 RABL2AQ9UBK7 228 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 ATPIF1Q9UII2 106 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MOSPD1Q9UJG1 213 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FBXO9Q9UK97 447 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 RAB23Q9ULC3 237 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 DUSP12Q9UNI6 340 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 FAM50BQ9Y247 325 aa6.27□□□□□ -1.41
USP28-202ENST00000535607 MAGED1Q9Y5V3 778 aaPredicted RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 KIAA0100Q14667 2235 aaKnown RBP6.27□□□□□ -1.41
USP28-202ENST00000535607 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 A6NL46 340 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 C9JVG2 144 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 E5RI56 91 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM72CH0Y354 149 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 H3BQ06 376 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 BTN3A3O00478 584 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 PIRO00625 290 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MYL12BO14950 172 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 SEC14L5O43304 696 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 NBNO60934 754 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TSPAN12O95859 305 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms