RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PLPP5Q8NEB5 264 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PPP1R14CQ8TAE6 165 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 WDR20Q8TBZ3 569 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 QRFPRQ96P65 431 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 KCNA7Q96RP8 456 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 DMRTA2Q96SC8 542 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ZNF382Q96SR6 550 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SERPINI1Q99574 410 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 LPAR4Q99677 370 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PAIP2Q9BPZ3 127 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 MAPKAP1Q9BPZ7 522 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 TREX2Q9BQ50 279 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 MECRQ9BV79 373 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 NPLQ9BXD5 320 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 C1QTNF3Q9BXJ4 246 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 STMN4Q9H169 189 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 GSTO2Q9H4Y5 243 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 CLK4Q9HAZ1 481 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 PRDM7Q9NQW5 492 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PRTFDC1Q9NRG1 225 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 LANCL2Q9NS86 450 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 FARSBQ9NSD9 589 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 ARGLU1Q9NWB6 273 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 AHSPQ9NZD4 102 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 LRFN1Q9P244 771 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 TIMM22Q9Y584 194 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 FOXE1O00358 373 aaPredicted RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 MANBAO00462 879 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PLPP1O14494 284 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PRRG2O14669 202 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 TRIM13O60858 407 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ULK1O75385 1050 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 SLC25A12O75746 678 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ETHE1O95571 254 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 IFNA16P05015 189 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ENO1P06733 434 aaKnown RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 KLK1P06870 262 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ZNF24P17028 368 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 SERPINB3P29508 390 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ALDH3A1P30838 453 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 PKNOX1P55347 436 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 TAS2R50P59544 299 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 DNAJB13P59910 316 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 HSF1Q00613 529 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 RHAGQ02094 409 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ID2Q02363 134 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 BTKQ06187 659 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 STX4Q12846 297 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 CUL3Q13618 768 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 CASP8Q14790 479 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PCLAFQ15004 111 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 MAPKAPK3Q16644 382 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 IMPG1Q17R60 797 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 GGTA1PQ4G0N0 100 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 RNFT1Q5M7Z0 435 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 C3P1Q6ZMU1 363 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ZCCHC23Q6ZST2 131 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 EXOC3L1Q86VI1 746 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 NUDT13Q86X67 352 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ANKRD42Q8N9B4 389 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 CA5BP1Q8WTZ4 195 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 SDCCAG3Q96C92 435 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 CSF3RQ99062 836 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 GATA5Q9BWX5 397 aaPredicted RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 MRPL1Q9BYD6 325 aaKnown RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 CDCP1Q9H5V8 836 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PNO1Q9NRX1 252 aaKnown RBP8.11□□□□□ -1.11
COPB1-210ENST00000533533 NMRK1Q9NWW6 199 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 MKS1Q9NXB0 559 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PHF11Q9UIL8 331 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 ZNF225Q9UK10 706 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 PPT2Q9UMR5 302 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 DAPP1Q9UN19 280 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 JMJD1CQ15652 2540 aa8.11□□□□□ -1.11
COPB1-210ENST00000533533 UBFD1O14562 309 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 NME2P1O60361 137 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 LDB3O75112 727 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 EEDO75530 441 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 ESRRBO95718 433 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 TNNI3P19429 210 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 NME2P22392 152 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 BUD31P41223 144 aaPredicted RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 CYB561P49447 251 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 HTR6P50406 440 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 HNRNPFP52597 415 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 SLC26A5P58743 744 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 NAA20P61599 178 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 HMGCS1Q01581 520 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 SPDYAQ5MJ70 313 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 CCNYL2Q5T2Q4 361 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 C10orf62Q5T681 223 aaPredicted RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 QSOX2Q6ZRP7 698 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 FRMD7Q6ZUT3 714 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms