RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 G6PC3Q9BUM1 346 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 POLDIP3Q9BY77 421 aaKnown RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CCDC59Q9P031 241 aaKnown RBP16.75■□□□□ 0.27
PHRF1-205ENST00000533464 LHX3Q9UBR4 397 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 CMAHPQ9Y471 501 aa16.75■□□□□ 0.27
PHRF1-205ENST00000533464 MROH6A6NGR9 719 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 NUAK1O60285 661 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 SPHARQ15513 63 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 GTF2IRD2BQ6EKJ0 949 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 PARS2Q7L3T8 475 aaKnown RBP16.74■□□□□ 0.27
PHRF1-205ENST00000533464 GTF2IRD2Q86UP8 949 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 ANKRD60Q9BZ19 345 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 PDE7BQ9NP56 450 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 ENPP4Q9Y6X5 453 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 CSN2P05814 226 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 TIMP2P16035 220 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 ITGB7P26010 798 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 DCKP27707 260 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 HSD11B1P28845 292 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 OR3A3P47888 321 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 OR3A2P47893 321 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 LBX1P52954 281 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 ARFRP1Q13795 201 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 DPPA4Q7L190 304 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 MRPL43Q8N983 215 aaKnown RBP16.74■□□□□ 0.27
PHRF1-205ENST00000533464 BRF2Q9HAW0 419 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 HHLA1C9JL84 531 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 CYB5AP00167 134 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 HTR1AP08908 422 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 GM2AP17900 193 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
PHRF1-205ENST00000533464 FBXO42Q6P3S6 717 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 HAVCR1Q96D42 359 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 STOML2Q9UJZ1 356 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 OR52A4PA6NMU1 304 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 SCRN3Q0VDG4 424 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 DUS1LQ6P1R4 473 aaKnown RBP16.74■□□□□ 0.27
PHRF1-205ENST00000533464 FIGLAQ6QHK4 219 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 CLEC14AQ86T13 490 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 OR4K5Q8NGD3 323 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 FUNDC2Q9BWH2 189 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 AASSQ9UDR5 926 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 HSPE1-MOB4S4R3N1 261 aa16.74■□□□□ 0.27
PHRF1-205ENST00000533464 ITGA3P26006 1051 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 RPL6Q02878 288 aaKnown RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PTPRRQ15256 657 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ARMC10Q8N2F6 343 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 SHKBP1Q8TBC3 707 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CIDECQ96AQ7 238 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HSPA12BQ96MM6 686 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CHMP1AQ9HD42 196 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 LAMP5Q9UJQ1 280 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 OXSR1O95747 527 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 TFPTP0C1Z6 253 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PEPDP12955 493 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HOXD8P13378 290 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CD83Q01151 205 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 TMEM164Q5U3C3 297 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF613Q6PF04 617 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 NEIL3Q8TAT5 605 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 UNC119BA6NIH7 251 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 SLITRK5O94991 958 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ALDOCP09972 364 aaKnown RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 STT3AP46977 705 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CSNK1DP48730 415 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ZNF101Q8IZC7 436 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 DTD2Q96FN9 168 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 EGLN2Q96KS0 407 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 FAM210AQ96ND0 272 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 GPR83Q9NYM4 423 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ANKMY1Q9P2S6 941 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PFDN2Q9UHV9 154 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 ARNTLO00327 626 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 DLGAP1O14490 977 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 EIF1AYO14602 144 aaKnown RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 NPC1O15118 1278 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 RNF13O43567 381 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 SEMA3BQ13214 749 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 C4orf46Q504U0 113 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 NSMAFQ92636 917 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 TMEM165Q9HC07 324 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HEBP1Q9NRV9 189 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 EIF3KQ9UBQ5 218 aaKnown RBP16.73■□□□□ 0.27
PHRF1-205ENST00000533464 SLX4Q8IY92 1834 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 A0A0X1KG70 313 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HK3P52790 923 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PMS2P3Q13401 168 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CAMK1Q14012 370 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 HS3ST5Q8IZT8 346 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 OR56A3Q8NH54 315 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PROKR1Q8TCW9 393 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 RTP3Q9BQQ7 232 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 PELI2Q9HAT8 420 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 GPR34Q9UPC5 381 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 CDH10Q9Y6N8 788 aa16.73■□□□□ 0.27
PHRF1-205ENST00000533464 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
PHRF1-205ENST00000533464 GRXCR2A6NFK2 248 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms