RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SLC26A5P58743 744 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 CHAF1BQ13112 559 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 GSTA3Q16772 222 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZNF750Q32MQ0 723 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 CPTPQ5TA50 214 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 C6orf163Q5TEZ5 329 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 FAM180BQ6P0A1 224 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 CCDC116Q8IYX3 515 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 GALNT16Q8N428 558 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 NATD1Q8N6N6 113 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 B3GNT7Q8NFL0 401 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 RFWD2Q8NHY2 731 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 PTPMT1Q8WUK0 201 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 CNRIP1Q96F85 164 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZNF681Q96N22 645 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZNF317Q96PQ6 595 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 EBF4Q9BQW3 602 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ARHGAP9Q9BRR9 750 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 MMP25Q9NPA2 562 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ATAD3AQ9NVI7 634 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ATP6V1HQ9UI12 483 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 G3BP2Q9UN86 482 aaKnown RBP10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 GPR45Q9Y5Y3 372 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 ACACAQ13085 2346 aa10.5□□□□□ -0.73
TRAPPC4-211ENST00000533012 MASP2O00187 686 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 SCAMP2O15127 329 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ATP1B1P05026 303 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ITGA3P26006 1051 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 NTSP30990 170 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 PGDP52209 483 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ARFIP2P53365 341 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 C21orf58P58505 322 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 RHDQ02161 417 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 SRSF11Q05519 484 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 PDE7AQ13946 482 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 CEBPEQ15744 281 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 TMEM198Q66K66 360 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 CPZQ66K79 652 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ANKRD26P1Q6NSI1 321 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 JMJD6Q6NYC1 403 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 YTHDF3Q7Z739 585 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 RIMKLAQ8IXN7 391 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 LRRC25Q8N386 305 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 KRTCAP2Q8N6L1 136 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 NFAM1Q8NET5 270 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 STON2Q8WXE9 905 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 EXTL1Q92935 676 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 COQ8BQ96D53 544 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZNF764Q96H86 408 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 SENP5Q96HI0 755 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 THOC3Q96J01 351 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 ART5Q96L15 291 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 CCT8L2Q96SF2 557 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR8D2Q9GZM6 311 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 LHPPQ9H008 270 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 CXorf21Q9HAI6 301 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 KCNK13Q9HB14 408 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 COPS7AQ9UBW8 275 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 PPIEQ9UNP9 301 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 FER1L5A0AVI2 2057 aa10.49□□□□□ -0.73
TRAPPC4-211ENST00000533012 A0A1W2PS29 197 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 A8MUI8 341 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 MYO1GB0I1T2 1018 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 E9PBE3 544 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 ANKRD28O15084 1053 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 PDPK1O15530 556 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 DNAJB5O75953 348 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 CLCN2P51788 898 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 GPR143P51810 404 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 SEC24CP53992 1094 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 NME5P56597 212 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 STX1BP61266 288 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 UFM1P61960 85 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 IRX1P78414 480 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 Q0VFX4 171 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 MAP4K2Q12851 820 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZNF267Q14586 743 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 PRSS53Q2L4Q9 553 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 SPRED3Q2MJR0 410 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 PGS1Q32NB8 556 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 METTL21CQ5VZV1 264 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 DGAT2L6Q6ZPD8 337 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 GALNT12Q8IXK2 581 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 MIER2Q8N344 545 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR7A2PQ8NGA2 310 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 OR1N1Q8NGS0 311 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 SLC2A12Q8TD20 617 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 ELP5Q8TE02 316 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 NCLNQ969V3 563 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZBED6CLQ96FA7 236 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 VMP1Q96GC9 406 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 FBXL20Q96IG2 436 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 ZBTB18Q99592 522 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 CNPPD1Q9BV87 410 aa10.48□□□□□ -0.73
TRAPPC4-211ENST00000533012 TMEM120AQ9BXJ8 343 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms