RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ASB15Q8WXK1 588 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 ARL8AQ96BM9 186 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 TMEM237Q96Q45 408 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 SMC6Q96SB8 1091 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 DMRTA2Q96SC8 542 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 DDX31Q9H8H2 851 aaKnown RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 TIMMDC1Q9NPL8 285 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 PLSCR2Q9NRY7 297 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 PSD3Q9NYI0 1048 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 TMCO1Q9UM00 188 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 TNPO3Q9Y5L0 923 aaKnown RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 SPACA6W5XKT8 324 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 A0A1B0GTH9 108 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 A8MVJ9 347 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 G3V3Y1 287 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 FOXE1O00358 373 aaPredicted RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 PPP6CO00743 305 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 TFECO14948 347 aaPredicted RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 HNRNPRO43390 633 aaKnown RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 NADKO95544 446 aaPredicted RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 GBAP04062 536 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 CLPSP04118 112 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 ARFIP1P53367 373 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 PRKAA2P54646 552 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 CASP6P55212 293 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 CUL3Q13618 768 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 ZNF630Q2M218 657 aaPredicted RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 CCDC153Q494R4 210 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 UNC50Q53HI1 259 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 MTFR2Q6P444 385 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 LYPD8Q6UX82 237 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 HDXQ7Z353 690 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 CROCCP2Q86T23 111 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 TANKQ92844 425 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 TLCD1Q96CP7 247 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 MTFMTQ96DP5 389 aaKnown RBP17.53■□□□□ 0.4
SSH3-209ENST00000532600 FAM111AQ96PZ2 611 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 C1QTNF3Q9BXJ4 246 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 PRM3Q9NNZ6 103 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 HPF1Q9NWY4 346 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 SENP1Q9P0U3 644 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 ERVK-11Q9UQG0 969 aa17.53■□□□□ 0.4
SSH3-209ENST00000532600 GLOD5A6NK44 160 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 C19orf84I3L1E1 186 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 CLDN9O95484 217 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 ESRRAP11474 423 aaPredicted RBP17.52■□□□□ 0.4
SSH3-209ENST00000532600 ABOP16442 354 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 TSPAN8P19075 237 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 TAC1P20366 129 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 HTR1EP28566 365 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 PCLAFQ15004 111 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 PIGGQ5H8A4 983 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 ZNF678Q5SXM1 525 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 MARVELD2Q8N4S9 558 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 OR2M7Q8NG81 312 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 DGAT2Q96PD7 388 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 NTMT1Q9BV86 223 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 MS4A12Q9NXJ0 267 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 PHF11Q9UIL8 331 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 PPT2Q9UMR5 302 aa17.52■□□□□ 0.4
SSH3-209ENST00000532600 ZNF407Q9C0G0 2248 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 PDE9AO76083 593 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 GLSO94925 669 aaPredicted RBP17.51■□□□□ 0.39
SSH3-209ENST00000532600 AIFM1O95831 613 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 FAM58BPP0C7Q3 252 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 MYL2P10916 166 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 CPA3P15088 417 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 ALOX15P16050 662 aaPredicted RBP17.51■□□□□ 0.39
SSH3-209ENST00000532600 ETV4P43268 484 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 CDH13P55290 713 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 HERVK_113P63132 956 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 ASPHQ12797 758 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 XKRXQ6PP77 449 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 C10orf107Q8IVU9 208 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 FAM57AQ8TBR7 257 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 REPS1Q96D71 796 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 ERVK-6Q9BXR3 956 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 TTTY12Q9BZ98 90 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 DEFB127Q9H1M4 99 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 VIPAS39Q9H9C1 493 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 SH2D2AQ9NP31 389 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 SSU72Q9NP77 194 aaKnown RBP17.51■□□□□ 0.39
SSH3-209ENST00000532600 LYARQ9NX58 379 aaKnown RBP17.51■□□□□ 0.39
SSH3-209ENST00000532600 TEX10Q9NXF1 929 aaPredicted RBP17.51■□□□□ 0.39
SSH3-209ENST00000532600 ZNF225Q9UK10 706 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 ACTL7BQ9Y614 415 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 CACNA1CQ13936 2221 aa17.51■□□□□ 0.39
SSH3-209ENST00000532600 PDZD2O15018 2839 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 DCHS2Q6V1P9 2916 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 FAM166BA8MTA8 275 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 PGRMC2O15173 223 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 CDC40O60508 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSH3-209ENST00000532600 GPR75O95800 540 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 CCL3P10147 92 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 IMPDH1P20839 514 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 AGAP20933 346 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 PTGS2P35354 604 aa17.5■□□□□ 0.39
SSH3-209ENST00000532600 PLIN5Q00G26 463 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms