RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FBXO48Q5FWF7 155 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PAGE3Q5JUK9 113 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC8B1Q6J4K2 584 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 DOK6Q6PKX4 331 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CHST9Q7L1S5 443 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 DPPA2Q7Z7J5 298 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CCDC190Q86UF4 302 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MARCH9Q86YJ5 346 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CEP97Q8IW35 865 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NLGN4XQ8N0W4 816 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KCNJ9Q92806 393 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NELL1Q92832 810 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PTP4A1Q93096 173 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MRPL38Q96DV4 380 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 HMCESQ96FZ2 354 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SEMA3CQ99985 751 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 RCOR3Q9P2K3 495 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF69Q9UC07 566 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF639Q9UID6 485 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NOSIPQ9Y314 301 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 OR6C65A6NJZ3 312 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 J3KR12 359 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SOX1O00570 391 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 FFAR3O14843 346 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 TO15178 435 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 GPR42O15529 346 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC19A2O60779 497 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MT-CYBP00156 380 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 RRASP10301 218 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CDH5P33151 784 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SOAT1P35610 550 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CD86P42081 329 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ARCN1P48444 511 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PGGT1BP53609 377 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC16A1P53985 500 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 EPHA5P54756 1037 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PITPNAQ00169 270 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KRT33BQ14525 404 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF273Q14593 569 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 LARS2Q15031 903 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PDE12Q6L8Q7 609 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 LARP4Q71RC2 724 aaKnown RBP eCLIP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 LGI4Q8N135 537 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SYNPOQ8N3V7 929 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NKAPQ8N5F7 415 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF655Q8N720 491 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KIAA1958Q8N8K9 716 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 OR6S1Q8NH40 331 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 USP7Q93009 1102 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 IGSF8Q969P0 613 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NKX6-2Q9C056 277 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SMOC2Q9H3U7 446 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ARNT2Q9HBZ2 717 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MTMR10Q9NXD2 777 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 LIPT1Q9Y234 373 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 TRAPPC4Q9Y296 219 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 BACE2Q9Y5Z0 518 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 HS3ST4Q9Y661 456 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1E1O43324 174 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CHST10O43529 356 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 NARSO43776 548 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 OR10H3O60404 316 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SDC3O75056 442 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PTP4A3O75365 173 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KRT33AO76009 404 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 OR4F21O95013 312 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 GSRP00390 522 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ACADMP11310 421 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PBLDP30039 288 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MMP12P39900 470 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KIAA1024LP59773 190 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 TNK1Q13470 666 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 GK2Q14410 553 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 EXOC3L2Q2M3D2 409 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SOWAHCQ53LP3 525 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF678Q5SXM1 525 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 C1orf53Q5VUE5 145 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PRAMEF13Q5VWM6 474 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PTRHD1Q6GMV3 140 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PTRH1Q86Y79 214 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC22A15Q8IZD6 547 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PELI3Q8N2H9 469 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PNPLA1Q8N8W4 532 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 STOML3Q8TAV4 291 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MAFIPQ8WZ33 124 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ISL2Q96A47 359 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SAMD11Q96NU1 681 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 KCNA7Q96RP8 456 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SFXN1Q9H9B4 322 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 C11orf16Q9NQ32 467 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 AIG1Q9NVV5 245 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 MUTYHQ9UIF7 546 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 AGO1Q9UL18 857 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDHGB7Q9Y5F8 929 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDHA9Q9Y5H5 950 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 RLFQ13129 1914 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PAK4O96013 591 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms