RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MTTPP55157 894 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 SKP1P63208 163 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CSTF3Q12996 717 aaKnown RBP16.67■□□□□ 0.26
PTPN11-204ENST00000531326 STX3Q13277 289 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 RUNX2Q13950 521 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 UGT3A2Q3SY77 523 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 KRTCAP3Q53RY4 240 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 SH2D4BQ5SQS7 431 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 OR4C11Q6IEV9 310 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CHERPQ8IWX8 916 aaKnown RBP16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CLYBLQ8N0X4 340 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CA13Q8N1Q1 262 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 KIF2BQ8N4N8 673 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 SLC5A8Q8N695 610 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 ELP5Q8TE02 316 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 SERINC2Q96SA4 455 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 ACPTQ9BZG2 426 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 TUBB1Q9H4B7 451 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CDCP1Q9H5V8 836 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 CLK4Q9HAZ1 481 aaKnown RBP16.67■□□□□ 0.26
PTPN11-204ENST00000531326 SLC12A4Q9UP95 1085 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 TRAF6Q9Y4K3 522 aa16.67■□□□□ 0.26
PTPN11-204ENST00000531326 A0A088AWK7 358 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 HSPA4LO95757 839 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 FHP07954 510 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 SP1P08047 785 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 ZNF10P21506 573 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 HIST1H1TP22492 207 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 SSR2P43308 183 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 RAP1GDS1P52306 607 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 OR4D2P58180 307 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 HMGCS1Q01581 520 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 OC90Q02509 493 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 TBL3Q12788 808 aaKnown RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 AP5B1Q2VPB7 878 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 RNF165Q6ZSG1 346 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 TRIM46Q7Z4K8 759 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 ZNF227Q86WZ6 799 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 METTL4Q8N3J2 472 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 GBP7Q8N8V2 638 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 ACOT4Q8N9L9 421 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 TMEM178AQ8NBL3 297 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 RAB3IL1Q8TBN0 382 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 AGR3Q8TD06 166 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 TBC1D20Q96BZ9 403 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 CENPKQ9BS16 269 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 NPLQ9BXD5 320 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-204ENST00000531326 ROGDIQ9GZN7 287 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 MED4Q9NPJ6 270 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 LRFN1Q9P244 771 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 HAO1Q9UJM8 370 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 MEMO1Q9Y316 297 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 FIS1Q9Y3D6 152 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 DNAJC15Q9Y5T4 150 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 PTGDR2Q9Y5Y4 395 aa16.66■□□□□ 0.26
PTPN11-204ENST00000531326 F8P00451 2351 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 ASNA1O43681 348 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 B3GALT2O43825 422 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 SNNO75324 88 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 EEDO75530 441 aaKnown RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 KIR3DL1P43629 444 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 SMSP52788 366 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 HSF1Q00613 529 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 RNFT1Q5M7Z0 435 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 SLC25A25Q6KCM7 469 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 RPS19BP1Q86WX3 136 aaKnown RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 TRIM42Q8IWZ5 723 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 LGI4Q8N135 537 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 ZCCHC7Q8N3Z6 543 aaKnown RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 ZNF781Q8N8C0 355 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 MRPL1Q9BYD6 325 aaKnown RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 DDX31Q9H8H2 851 aaKnown RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 MANSC1Q9H8J5 431 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 VPS29Q9UBQ0 182 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-204ENST00000531326 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 CCL27Q9Y4X3 112 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 POLQO75417 2590 aa16.65■□□□□ 0.26
PTPN11-204ENST00000531326 A0A0A6YYD5 115 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 KLF11O14901 512 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 B4GALT2O60909 372 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 SNUPNO95149 360 aaKnown RBP16.64■□□□□ 0.25
PTPN11-204ENST00000531326 TPP2P29144 1249 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-204ENST00000531326 LIM2P55344 173 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 TAS2R50P59544 299 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 BTG2P78543 158 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 FGD2Q7Z6J4 655 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 NUDT13Q86X67 352 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 HORMAD2Q8N7B1 307 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 ZNF75CPQ92670 426 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-204ENST00000531326 MAPKAP1Q9BPZ7 522 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 INTS9Q9NV88 658 aaKnown RBP16.64■□□□□ 0.25
PTPN11-204ENST00000531326 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 KCMF1Q9P0J7 381 aa16.64■□□□□ 0.25
PTPN11-204ENST00000531326 DAPP1Q9UN19 280 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms