RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 FXYD1O00168 92 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CLDN4O14493 209 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 KCNH1O95259 989 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 HEXBP07686 556 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CSNK2A2P19784 350 aaPredicted RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 NT5EP21589 574 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 MC3RP41968 323 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PCBP4P57723 403 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 MTPNP58546 118 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RHAGQ02094 409 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SELPLGQ14242 412 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 NCF4Q15080 339 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 TGIF1Q15583 401 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 TRMT5Q32P41 509 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 SPDYE7PQ495Y7 208 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ANXA8L1Q5VT79 327 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ZNF621Q6ZSS3 439 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 OVCH1Q7RTY7 1134 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SCUBE1Q8IWY4 988 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 MSRB3Q8IXL7 192 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 FBXO30Q8TB52 745 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 TANKQ92844 425 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ZBED6CLQ96FA7 236 aaPredicted RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 ZNF681Q96N22 645 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CCDC115Q96NT0 180 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SLC46A1Q96NT5 459 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 OR1F2PQ96R84 312 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SPSB2Q99619 263 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ZPBPQ9BS86 351 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CRB3Q9BUF7 120 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ALOXE3Q9BYJ1 711 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 EFCAB1Q9HAE3 211 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.98□□□□□ -0.81
SOX6-213ENST00000530378 SLC25A37Q9NYZ2 338 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 VAPAQ9P0L0 249 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 C3orf18Q9UK00 162 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PSME2Q9UL46 239 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PTRH2Q9Y3E5 179 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 PCDHGA8Q9Y5G5 932 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CLDN16Q9Y5I7 305 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 HRKO00198 91 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RNASET2O00584 256 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 TBX19O60806 448 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CTNSO60931 367 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RECKO95980 971 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CT62P0C5K7 136 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CCNYL3P0C7X3 344 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 IGF2RP11717 2491 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PORP16435 677 aaPredicted RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 TCN2P20062 427 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SDHBP21912 280 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PGDP52209 483 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RPS26P62854 115 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 EEF1A2Q05639 463 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 TP53BP2Q13625 1128 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 NSDHLQ15738 373 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RABL3Q5HYI8 236 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 FAM111BQ6SJ93 734 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 DLEU7Q6UYE1 221 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 DEFB107AQ8IZN7 70 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 RNF148Q8N7C7 305 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PCYOX1LQ8NBM8 494 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 VPS37AQ8NEZ2 397 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 C8orf44Q96CB5 159 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 SLC7A6OSQ96CW6 309 aaPredicted RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 OTUB1Q96FW1 271 aaPredicted RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 SCNM1Q9BWG6 230 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PAIP1Q9H074 479 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 IKZF5Q9H5V7 419 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PIF1Q9H611 641 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 EQTNQ9NQ60 294 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PRDM9Q9NQV7 894 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 CROTQ9UKG9 612 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PADI1Q9ULC6 663 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PCDHGB4Q9UN71 923 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 NEUROG3Q9Y4Z2 214 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 PCDHB14Q9Y5E9 798 aa9.98□□□□□ -0.81
SOX6-213ENST00000530378 MRPS18BQ9Y676 258 aaKnown RBP9.98□□□□□ -0.81
SOX6-213ENST00000530378 APC2O95996 2303 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 A0A096LPI6 279 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 RNF103-CHMP3A0A140T963 221 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 STMND1H3BQB6 276 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 RAD1O60671 282 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 PCSK2P16519 638 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 PTPN6P29350 595 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 CPOXP36551 454 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 PRKAG1P54619 331 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 HSD17B7P56937 341 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 MAP7Q14244 749 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 EXOSC7Q15024 291 aaKnown RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 MRPL14Q6P1L8 145 aaKnown RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 WDR53Q7Z5U6 358 aaPredicted RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 NLGN4XQ8N0W4 816 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 NLGN4YQ8NFZ3 816 aaPredicted RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 OR7G2Q8NG99 324 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 ZFP28Q8NHY6 868 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms