RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TSEN54Q7Z6J9 526 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 JPH3Q8WXH2 748 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF354BQ96LW1 612 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 OR51I1Q9H343 314 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 RIBC2Q9H4K1 309 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 TRIM45Q9H8W5 580 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 UCK1Q9HA47 277 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 HRASLS2Q9NWW9 162 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 SCN3BQ9NY72 215 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 NTMQ9P121 344 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 C5AR2Q9P296 337 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 GPC6Q9Y625 555 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 IGHV1OR15-9A0A0B4J2B8 117 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 METTL12A8MUP2 240 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 C4orf51C9J302 202 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 H3BSA7 217 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC28A2O43868 658 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 PRAMEF10O60809 474 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 NDUFS2O75306 463 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CPNE6O95741 557 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 OXSR1O95747 527 aaPredicted RBP13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF888P0CJ79 500 aaPredicted RBP13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CD247P20963 164 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CPN2P22792 545 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 ELK4P28324 431 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 IL5RAQ01344 420 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TNFRSF17Q02223 184 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TEKQ02763 1124 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TFF2Q03403 129 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 LSAMPQ13449 338 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TMEM31Q5JXX7 168 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 NIPAL1Q6NVV3 410 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 Q6ZS52 159 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 KCTD8Q6ZWB6 473 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 RNF44Q7L0R7 432 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF605Q86T29 641 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CCDC116Q8IYX3 515 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 LGI4Q8N135 537 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 LINC00471Q8N535 108 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 OR10G2Q8NGC3 310 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 OR4K14Q8NGD5 310 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 OR10G6Q8NH81 332 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 XAGE5Q8WWM1 108 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF681Q96N22 645 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 MAPKAP1Q9BPZ7 522 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CCNB1IP1Q9NPC3 277 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TMEM9Q9P0T7 183 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 KCND3Q9UK17 655 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 KLHL20Q9Y2M5 609 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 SH3GLB1Q9Y371 365 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 TESMINQ9Y4I5 508 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 SNX5Q9Y5X3 404 aa13.94□□□□□ -0.18
ECHDC1-220ENST00000528402 CCDC88CQ9P219 2028 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A0J9YVX5 310 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 CASC3O15234 703 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 B4GALT2O60909 372 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 MITFO75030 526 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 SOX30O94993 753 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 CCNB2O95067 398 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 GADD45GO95257 159 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 OR12D1P0DN82 309 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 HOXB3P14651 431 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 JUNDP17535 347 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ALOX12P18054 663 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 LIMS1P48059 325 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 CLK3P49761 638 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 STARD6P59095 220 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 IL1RL1Q01638 556 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ELOCQ15369 112 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 MEP1AQ16819 746 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 LEXMQ3ZCV2 418 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 C18orf63Q68DL7 685 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 GKN2Q86XP6 184 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ERI1Q8IV48 349 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 PARP8Q8N3A8 854 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 KCT2Q8NC54 265 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 SUN3Q8TAQ9 357 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC37A2Q8TED4 501 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ZDHHC1Q8WTX9 485 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 PHF10Q8WUB8 498 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 HLA-CQ95604 372 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ELP4Q96EB1 424 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 BARD1Q99728 777 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 MACROD1Q9BQ69 325 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 ACER3Q9NUN7 267 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 KCMF1Q9P0J7 381 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 TRPC4Q9UBN4 977 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 SEC14L3Q9UDX4 400 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 TMCC3Q9ULS5 477 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 PCDHGB1Q9Y5G3 927 aa13.93□□□□□ -0.18
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