RNA–Protein interactions for RNA: ENST00000527797.6

VPS28-208, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,609 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-208ENST00000527797 ZNF318Q5VUA4 2279 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 LRP3O75074 770 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 CSTF2P33240 577 aaKnown RBP eCLIP19.76■□□□□ 0.75
VPS28-208ENST00000527797 CASP9P55211 416 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 TP53BP2Q13625 1128 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 ADRM1Q16186 407 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 MTX3Q5HYI7 312 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 GCNT6Q5T4J0 391 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 TMEM107Q6UX40 140 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 PTOV1Q86YD1 416 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 NCLNQ969V3 563 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 ANKRD9Q96BM1 317 aaPredicted RBP19.76■□□□□ 0.75
VPS28-208ENST00000527797 TBC1D20Q96BZ9 403 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 DUS3LQ96G46 650 aaKnown RBP19.76■□□□□ 0.75
VPS28-208ENST00000527797 MAGED4Q96JG8 741 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 RBCK1Q9BYM8 510 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 SLC7A5P2Q9GIP4 190 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 C3orf14Q9HBI5 128 aa19.76■□□□□ 0.75
VPS28-208ENST00000527797 FAF1Q9UNN5 650 aaPredicted RBP19.76■□□□□ 0.75
VPS28-208ENST00000527797 UNC13CQ8NB66 2214 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 A0A1B0GX78 115 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 AGRPO00253 132 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 CTNSO60931 367 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 TNFRSF21O75509 655 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 BAG2O95816 211 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 NUDT7P0C024 238 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 ETFAP13804 333 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 OR1D4P47884 311 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 PRIM2P49643 509 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 SZRD1Q7Z422 152 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 OR56A1Q8NGH5 318 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 FAM162AQ96A26 154 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 ELP4Q96EB1 424 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 YIPF2Q9BWQ6 316 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 IRF2BPLQ9H1B7 796 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 ZNF304Q9HCX3 659 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 PRTFDC1Q9NRG1 225 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 SIDT1Q9NXL6 827 aaKnown RBP19.75■□□□□ 0.75
VPS28-208ENST00000527797 ANGPTL2Q9UKU9 493 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 HCN4Q9Y3Q4 1203 aa19.75■□□□□ 0.75
VPS28-208ENST00000527797 C4orf47A7E2U8 309 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 H3BNX3 289 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 EMC8O43402 210 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 B4GALT2O60909 372 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 CBFA2T3O75081 653 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 CREG1O75629 220 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 FHP07954 510 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 ANPEPP15144 967 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 PTGER1P34995 402 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 XCR1P46094 333 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 PRR5P85299 388 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 SLC34A1Q06495 639 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 SLC13A2Q13183 592 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 VEZF1Q14119 521 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 LTB4RQ15722 352 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 B3GNT8Q7Z7M8 397 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 BPHLQ86WA6 291 aaPredicted RBP19.74■□□□□ 0.75
VPS28-208ENST00000527797 C11orf65Q8NCR3 313 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 CDC6Q99741 560 aa19.74■□□□□ 0.75
VPS28-208ENST00000527797 COL5A1P20908 1838 aaPredicted RBP19.74■□□□□ 0.75
VPS28-208ENST00000527797 TCRBV5S2A0A599 114 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 ATP1B1P05026 303 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 UMPSP11172 480 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 SLC7A1P30825 629 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 MC3RP41968 323 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 PRKAG1P54619 331 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 RBBP4Q09028 425 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 DSG2Q14126 1118 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 ERV3-1Q14264 604 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 RHBDD2Q6NTF9 364 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 TMEM126BQ8IUX1 230 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 AGBL5Q8NDL9 886 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 ADCY4Q8NFM4 1077 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 OR52E4Q8NGH9 312 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 CANT1Q8WVQ1 401 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 KAT2AQ92830 837 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 SLC35G5Q96KT7 338 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 TMEM38AQ9H6F2 299 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 AP4S1Q9Y587 144 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 MYOCOSA0A1B0GUC4 107 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 DHRS12A0PJE2 317 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 EFCAB7A8K855 629 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 PLOD2O00469 737 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 SLITRK5O94991 958 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 GPIP06744 558 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 SLC35E2P0CK97 266 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 BMP2P12643 396 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 FBLP22087 321 aaKnown RBP19.73■□□□□ 0.75
VPS28-208ENST00000527797 PSMA4P25789 261 aaKnown RBP19.73■□□□□ 0.75
VPS28-208ENST00000527797 PCGF2P35227 344 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 MAGEA8P43361 318 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 HSD17B7P56937 341 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 DSTNP60981 165 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 STX4Q12846 297 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 C16orf72Q14CZ0 275 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 ZNF630Q2M218 657 aaPredicted RBP19.73■□□□□ 0.75
VPS28-208ENST00000527797 CEACAM20Q6UY09 585 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 PPP1R3BQ86XI6 285 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 HORMAD2Q8N7B1 307 aa19.73■□□□□ 0.75
VPS28-208ENST00000527797 NETO1Q8TDF5 533 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 508.5 ms