RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
CAPN1-207ENST00000527189 TP63Q9H3D4 680 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-207ENST00000527189 L2HGDHQ9H9P8 463 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 ZBTB26Q9HCK0 441 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 COQ3Q9NZJ6 369 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 PCTPQ9UKL6 214 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
CAPN1-207ENST00000527189 NAV3Q8IVL0 2385 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 TRIM49D1C9J1S8 452 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 OR10H2O60403 315 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 ZNF354AO60765 605 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-207ENST00000527189 GUCY1B2O75343 617 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 OTCP00480 354 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 IGHG3P01860 377 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 TPOP07202 933 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 ABHD2P08910 425 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 PRF1P14222 555 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 COX6B1P14854 86 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 SERPINB3P29508 390 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 ARL1P40616 181 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-207ENST00000527189 IFT88Q13099 833 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 SLC22A10Q63ZE4 541 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 TTC19Q6DKK2 380 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-207ENST00000527189 OR52E8Q6IFG1 317 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 TIFABQ6ZNK6 161 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 SLC29A4Q7RTT9 530 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 SRRM1Q8IYB3 904 aaKnown RBP12.38□□□□□ -0.43
CAPN1-207ENST00000527189 FAM109AQ8N4B1 249 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 PAQR8Q8TEZ7 354 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 TP53INP1Q96A56 240 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 CDK15Q96Q40 435 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 SH2D2AQ9NP31 389 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 NMRK1Q9NWW6 199 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 CNIH4Q9P003 139 aa12.38□□□□□ -0.43
CAPN1-207ENST00000527189 DCHS2Q6V1P9 2916 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 PINLYPA6NC86 204 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 SUSD5O60279 629 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 PDE9AO76083 593 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 AIFM1O95831 613 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 RPS17P08708 135 aaKnown RBP12.37□□□□□ -0.43
CAPN1-207ENST00000527189 PIK3R1P27986 724 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 SLC37A1P57057 533 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 HERVK_113P63132 956 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ERVK-8P63133 956 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 FOXO1Q12778 655 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 TRAF3Q13114 568 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ZNF267Q14586 743 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-207ENST00000527189 SLC10A1Q14973 349 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 RNF111Q6ZNA4 994 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
CAPN1-207ENST00000527189 GDF7Q7Z4P5 450 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 CD163Q86VB7 1156 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 TAGAPQ8N103 731 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 METTL4Q8N3J2 472 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 TMEM151AQ8N4L1 468 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 OR4F6Q8NGB9 312 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 OR4K14Q8NGD5 310 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 CA5BP1Q8WTZ4 195 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 SPACA9Q96E40 222 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-207ENST00000527189 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ERVK-6Q9BXR3 956 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ELOVL6Q9H5J4 265 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 BRF2Q9HAW0 419 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 ERVK-19Q9WJR5 959 aa12.37□□□□□ -0.43
CAPN1-207ENST00000527189 NIPBLQ6KC79 2804 aaeCLIP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 GLOD5A6NK44 160 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 WASHC1A8K0Z3 465 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CAPN14A8MX76 684 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 HRKO00198 91 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 BCKDKO14874 412 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 ZNHIT1O43257 154 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 NADKO95544 446 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 KLK1P06870 262 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 TUBBP07437 444 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 FBXO45P0C2W1 286 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CCL3P10147 92 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 TAC1P20366 129 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 EBPQ15125 230 aaKnown RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 KRTAP21-3Q3LHN1 58 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 GXYLT1Q4G148 440 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 CCNYL2Q5T2Q4 361 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 LYPD8Q6UX82 237 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 C3P1Q6ZMU1 363 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 ACAD11Q709F0 780 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 ZNF483Q8TF39 744 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-207ENST00000527189 RND1Q92730 232 aa12.36□□□□□ -0.43
CAPN1-207ENST00000527189 SDCCAG3Q96C92 435 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms