RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SLC15A1P46059 708 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CLK1P49759 484 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 RAE1P78406 368 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SIM1P81133 766 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 EEF1A2Q05639 463 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GAB1Q13480 694 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 KRR1Q13601 381 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 DOC2BQ14184 412 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CLPPQ16740 277 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SYT16Q17RD7 645 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 FNDC3BQ53EP0 1204 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 C10orf62Q5T681 223 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 FRG2Q64ET8 278 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 Q6ZPB1 254 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PIP4P1Q86T03 277 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF605Q86T29 641 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 P3H2Q8IVL5 708 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 UBQLNLQ8IYU4 475 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CLECL1Q8IZS7 167 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CLDN19Q8N6F1 224 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PAF1Q8N7H5 531 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ATG16L2Q8NAA4 619 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 OR10G2Q8NGC3 310 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GOT1L1Q8NHS2 421 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SETD6Q8TBK2 473 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF675Q8TD23 568 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 HTRA1Q92743 480 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF775Q96BV0 537 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 COQ8BQ96D53 544 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 APOLD1Q96LR9 279 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 WDFY2Q96P53 400 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 FRG2BQ96QU4 278 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SNX18Q96RF0 628 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 DOHHQ9BU89 302 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GPR174Q9BXC1 333 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CDCA4Q9BXL8 241 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 OR51E2Q9H255 320 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TPK1Q9H3S4 243 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ZFYVE1Q9HBF4 777 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 FZD3Q9NPG1 666 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CD93Q9NPY3 652 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 RASSF1Q9NS23 344 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ABCB8Q9NUT2 735 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM184CQ9NVA4 438 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 DNAJC11Q9NVH1 559 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 WSB2Q9NYS7 404 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CNOT2Q9NZN8 540 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 NDUFAF4Q9P032 175 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SPATA7Q9P0W8 599 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 USP36Q9P275 1121 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SPASTQ9UBP0 616 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 FTSJ1Q9UET6 329 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SUSD2Q9UGT4 822 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 NDOR1Q9UHB4 597 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ATP6V1HQ9UI12 483 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CRLS1Q9UJA2 301 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 MKLN1Q9UL63 735 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TBC1D24Q9ULP9 559 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 WASF3Q9UPY6 502 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 MAPRE3Q9UPY8 281 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CORO2BQ9UQ03 480 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 RUVBL1Q9Y265 456 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 BTBD3Q9Y2F9 522 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM98Q9Y2Y6 226 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PCDHGB6Q9Y5F9 930 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PCDHGB3Q9Y5G1 929 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CFAP20Q9Y6A4 193 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SPAARA0A1B0GVQ0 90 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 A8MU76 341 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 METTL12A8MUP2 240 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 ADAMDEC1O15204 470 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 TBL1XO60907 577 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 LRATO95237 230 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CLDN7O95471 211 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DLGAP3O95886 979 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RECKO95980 971 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 STSP08842 583 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 DBTP11182 482 aaKnown RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 LAMP1P11279 417 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 EPXP11678 715 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 SPINK2P20155 84 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CHMP24386 653 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 C21orf33P30042 268 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-223ENST00000524033 HLA-FP30511 346 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CCR7P32248 378 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 HNF1BP35680 557 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 CSKP41240 450 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 NSG1P42857 185 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 NR4A2P43354 598 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 RGS6P49758 472 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 HNMTP50135 292 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 NEK2P51955 445 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 HMGA2P52926 109 aa7.43□□□□□ -1.22
SPIDR-223ENST00000524033 AP1S2P56377 157 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms