RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF223Q9UK11 482 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 PCDHGB6Q9Y5F9 930 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 PCDHGA10Q9Y5H3 936 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF780BQ9Y6R6 833 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 OR6C76A6NM76 312 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 TTLL8A6PVC2 850 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 GABRR3A8MPY1 467 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 TMEM233B4DJY2 109 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 PIP5K1BO14986 540 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 SASH3O75995 380 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 IGKV3-11P04433 115 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 ATP1B1P05026 303 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 IL3P08700 152 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 CPMP14384 443 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 DDCP20711 480 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 BGNP21810 368 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 MAPK1P28482 360 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 TRHRP34981 398 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 ALDH9A1P49189 494 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 WDR4P57081 412 aaKnown RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 XKR7Q5GH72 579 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 ATG16L1Q676U5 607 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 FCRLBQ6BAA4 426 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 GALNT12Q8IXK2 581 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 GPALPP1Q8IXQ4 340 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.68□□□□□ -0.542e-10■■■■■ 37.7
VEGFA-225ENST00000523950 ARL8AQ96BM9 186 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 KLHL29Q96CT2 875 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF764Q96H86 408 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 EBPLQ9BY08 206 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.68□□□□□ -0.543e-8■■□□□ 11.5
VEGFA-225ENST00000523950 TRIM45Q9H8W5 580 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 GIMAP4Q9NUV9 329 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 UTS2RQ9UKP6 389 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 ENTPD4Q9Y227 616 aa11.68□□□□□ -0.54
VEGFA-225ENST00000523950 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 POLR3HQ9Y535 204 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-225ENST00000523950 SMG1Q96Q15 3661 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 MYOCOSA0A1B0GUC4 107 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ITM2AO43736 263 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 PRAMEF2O60811 474 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ERAL1O75616 437 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 SLITRK5O94991 958 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 LINC00032P0C843 101 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 DDX5P17844 614 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 NT5EP21589 574 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 RPL14P50914 215 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ERVK-8P63133 956 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 RNF4P78317 190 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 TLE1Q04724 770 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 C2orf80Q0P641 193 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 BST1Q10588 318 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 TUBA3CQ13748 450 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 CEBPEQ15744 281 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 SMU1Q2TAY7 513 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 FAM71E1Q6IPT2 247 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 TUBA3EQ6PEY2 450 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 RNF111Q6ZNA4 994 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 LRRC34Q8IZ02 419 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 LRRC25Q8N386 305 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 AMER2Q8N7J2 671 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF781Q8N8C0 355 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 OR7G1Q8NGA0 311 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 AGR3Q8TD06 166 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 UCN3Q969E3 161 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 PPWD1Q96BP3 646 aaKnown RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ZBTB9Q96C00 473 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 C19orf60Q96EN9 201 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF681Q96N22 645 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 CXorf21Q9HAI6 301 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 MIEF1Q9NQG6 463 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 SLC35C2Q9NQQ7 365 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 TAS2R7Q9NYW3 318 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 PLA2G3Q9NZ20 509 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-225ENST00000523950 MYOTQ9UBF9 498 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 ERVK-19Q9WJR5 959 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 CSAG2Q9Y5P2 127 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 PTGDR2Q9Y5Y4 395 aa11.67□□□□□ -0.54
VEGFA-225ENST00000523950 CROCCQ5TZA2 2017 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 WASHC1A8K0Z3 465 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 TBX19O60806 448 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 SKAP2O75563 359 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-225ENST00000523950 ITGA10O75578 1167 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 LYPLA1O75608 230 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-225ENST00000523950 CD46P15529 392 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 ASMTP46597 345 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 CYB561P49447 251 aa11.66□□□□□ -0.54
VEGFA-225ENST00000523950 HLCSP50747 726 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms