RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 NOTCH2Q04721 2471 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 EXOC1LA0A1B0GW35 172 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 GLSO94925 669 aaPredicted RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SEMA3DO95025 777 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 RPS17P08708 135 aaKnown RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SNRPAP09012 282 aaKnown RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SBK3P0C264 359 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 CNTFP26441 200 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 MAGEA5P43359 124 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 KIR3DL1P43629 444 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SPRED3Q2MJR0 410 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 ZNF791Q3KP31 576 aaPredicted RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 PRAMEF20Q5VT98 475 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 RGS9BPQ6ZS82 235 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SLC29A4Q7RTT9 530 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 MRPL46Q9H2W6 279 aaKnown RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 ZDHHC11Q9H8X9 412 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 IL1RL2Q9HB29 575 aa19.11■□□□□ 0.65
SDCBP-209ENST00000522243 FARSBQ9NSD9 589 aaKnown RBP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.11■□□□□ 0.65
SDCBP-209ENST00000522243 ZNF407Q9C0G0 2248 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 ATP6AP2A0A1C7CYW4 349 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 A8MT66 165 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 ATP6AP2O75787 350 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 CLPSP04118 112 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 CELA3AP09093 270 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 PIK3R1P27986 724 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 SLC37A1P57057 533 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 IFT88Q13099 833 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 EMC4Q5J8M3 183 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 NDUFAF5Q5TEU4 345 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 SLC22A10Q63ZE4 541 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 OR52E8Q6IFG1 317 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 FAM109AQ8N4B1 249 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 TMEM151AQ8N4L1 468 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 CA5BP1Q8WTZ4 195 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 SPACA9Q96E40 222 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-209ENST00000522243 WWTR1Q9GZV5 400 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 TP63Q9H3D4 680 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-209ENST00000522243 ELOVL6Q9H5J4 265 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 COQ3Q9NZJ6 369 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 TNFRSF10DQ9UBN6 386 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 TEX15Q9BXT5 2789 aa19.1■□□□□ 0.65
SDCBP-209ENST00000522243 CACNA1CQ13936 2221 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 CRYBG3Q68DQ2 2970 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 LRATO95237 230 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SLC35E2P0CK97 266 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 GCAP28676 217 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SSTR4P31391 388 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 PTGER4P35408 488 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 FOXO1Q12778 655 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 EBPQ15125 230 aaKnown RBP19.09■□□□□ 0.65
SDCBP-209ENST00000522243 GXYLT1Q4G148 440 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 CCNYL2Q5T2Q4 361 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 LETMD1Q6P1Q0 360 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 GDF7Q7Z4P5 450 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 FAM13CQ8NE31 585 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 OR5M9Q8NGP3 310 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 OR5M3Q8NGP4 307 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 ZNF483Q8TF39 744 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SELENOMQ8WWX9 145 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SMC6Q96SB8 1091 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 PNPLA3Q9NST1 481 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 AHSPQ9NZD4 102 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SLC12A4Q9UP95 1085 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.09■□□□□ 0.65
SDCBP-209ENST00000522243 NCKAP5O14513 1909 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 CELSR2Q9HCU4 2923 aa19.09■□□□□ 0.65
SDCBP-209ENST00000522243 ENO4A6NNW6 628 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 OR4F21O95013 312 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 PDYNP01213 254 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 CT62P0C5K7 136 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 GGTA1PQ4G0N0 100 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 TMEM211Q6ICI0 200 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 ADGRD1Q6QNK2 874 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 TMEM64Q6YI46 380 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 TRILQ7L0X0 811 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 METTL4Q8N3J2 472 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 SLC15A4Q8N697 577 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 TRPC4APQ8TEL6 797 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 PAQR8Q8TEZ7 354 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 HBEGFQ99075 208 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 CXorf21Q9HAI6 301 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 SH2D2AQ9NP31 389 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 TMEM216Q9P0N5 145 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 DNAJC13O75165 2243 aa19.08■□□□□ 0.64
SDCBP-209ENST00000522243 C2orf92A0A1B0GVN3 265 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 OTCP00480 354 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 IGHG3P01860 377 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 NT5EP21589 574 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 GALNSP34059 522 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 MAPK12P53778 367 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 KCNJ2P63252 427 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 SLC10A1Q14973 349 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 LGSNQ5TDP6 509 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF585AQ6P3V2 769 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 PAGE2Q7Z2X7 111 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 GALNT12Q8IXK2 581 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF295-AS1Q8N0V1 137 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms