RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LYVE1Q9Y5Y7 322 aa17.43■□□□□ 0.38
TRAPPC9-210ENST00000521667 TNFRSF11BO00300 401 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ZSCAN9O15535 394 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 JRKO75564 520 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 FHP07954 510 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 NME1P15531 152 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 TYRP1P17643 537 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 CPN2P22792 545 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 MAOBP27338 520 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ELK4P28324 431 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 POLR2IP36954 125 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ANXA11P50995 505 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 PRKAG1P54619 331 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 PPP1CAP62136 330 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 RACK1P63244 317 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 IL18R1Q13478 541 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 DUSP7Q16829 419 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 FAHD1Q6P587 224 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 TMEM107Q6UX40 140 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ZNF655Q8N720 491 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ATG16L2Q8NAA4 619 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 OR56A1Q8NGH5 318 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 OR5D16Q8NGK9 328 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 C10orf90Q96M02 699 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 TRPC4Q9UBN4 977 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 PCDHGA8Q9Y5G5 932 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 TLR4O00206 839 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 SLC28A2O43868 658 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 DNAJB5O75953 348 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 MFN2O95140 757 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 EIF2S1P05198 315 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ALOX12P18054 663 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 CDH2P19022 906 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ALDH3B2P48448 385 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 LIM2P55344 173 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 IL1RL1Q01638 556 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 RPL6Q02878 288 aaKnown RBP17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 RUNX2Q13950 521 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 MANEAQ5SRI9 462 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ZNF691Q5VV52 312 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 ZNF438Q7Z4V0 828 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 XAGE5Q8WWM1 108 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 RIBC2Q9H4K1 309 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 KRT84Q9NSB2 600 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 EXD2Q9NVH0 621 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 POMT2Q9UKY4 750 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 DAPP1Q9UN19 280 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 DNAH14Q0VDD8 3507 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 USP34Q70CQ2 3546 aa17.42■□□□□ 0.38
TRAPPC9-210ENST00000521667 MDC1Q14676 2089 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 PRAMEF27A3QJZ7 478 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 BCKDKO14874 412 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 EMC8O43402 210 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 UGT2B11O75310 529 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 HMGN2P05204 90 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 CD247P20963 164 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 XCR1P46094 333 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 YAP1P46937 504 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 MAZP56270 477 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 PRR5P85299 388 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 SPIBQ01892 262 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 KCNC4Q03721 635 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 SYPL1Q16563 259 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 CNPY1Q3B7I2 92 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 RBM44Q6ZP01 1051 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 OR9A2Q8NGT5 310 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 DGCR14Q96DF8 476 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 ZNF607Q96SK3 696 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 MS4A12Q9NXJ0 267 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 ENPP4Q9Y6X5 453 aa17.41■□□□□ 0.38
TRAPPC9-210ENST00000521667 STK25O00506 426 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 IFNW1P05000 195 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 PAX7P23759 505 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 PPP2R1BP30154 601 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 TLX1P31314 330 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 LASP1Q14847 261 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 GKN2Q86XP6 184 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 AVL9Q8NBF6 648 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 OR4C15Q8NGM1 316 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 LMX1AQ8TE12 382 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 ADAMTS16Q8TE57 1224 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 GIPC3Q8TF64 312 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 ELP4Q96EB1 424 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 PIP5K1AQ99755 562 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 TREX2Q9BQ50 279 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 MIR1-1HGQ9H1L0 117 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 SEMA6CQ9H3T2 930 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 TBC1D17Q9HA65 648 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 C3orf14Q9HBI5 128 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 PRDM9Q9NQV7 894 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 MRPS2Q9Y399 296 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 FAM32AQ9Y421 112 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 RECKO95980 971 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 FESP07332 822 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 NR2F1P10589 423 aa17.4■□□□□ 0.38
TRAPPC9-210ENST00000521667 MC3RP41968 323 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms