RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ACOXLQ9NUZ1 547 aa4.05□□□□□ -1.76
SKP1-208ENST00000521216 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
SKP1-208ENST00000521216 DIMT1Q9UNQ2 313 aaKnown RBP4.05□□□□□ -1.76
SKP1-208ENST00000521216 MRPL11Q9Y3B7 192 aaKnown RBP4.05□□□□□ -1.76
SKP1-208ENST00000521216 COL2A1P02458 1487 aaPredicted RBP4.05□□□□□ -1.76
SKP1-208ENST00000521216 FGD5Q6ZNL6 1462 aa4.05□□□□□ -1.76
SKP1-208ENST00000521216 TRIM49BA6NDI0 452 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 KERAO60938 352 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 HSF2BPO75031 334 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 REC8O95072 547 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 MELTFP08582 738 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 AREGP15514 252 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 PPP2R1BP30154 601 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 COPB2P35606 906 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 TKTL1P51854 596 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 ARF5P84085 180 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 CRMP1Q14194 572 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 C15orf32Q32M92 178 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 UNC50Q53HI1 259 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 NHLRC3Q5JS37 347 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 LIPJQ5W064 366 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 REP15Q6BDI9 236 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 SPINK14Q6IE38 97 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 ZNF410Q86VK4 478 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 HIPK1Q86Z02 1210 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 OR4F5Q8NH21 305 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 RBM18Q96H35 190 aaKnown RBP4.04□□□□□ -1.76
SKP1-208ENST00000521216 ZNF560Q96MR9 790 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 SPAG8Q99932 426 aaPredicted RBP4.04□□□□□ -1.76
SKP1-208ENST00000521216 ACAT2Q9BWD1 397 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 IL1RL2Q9HB29 575 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 GPR83Q9NYM4 423 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 VPS54Q9P1Q0 977 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 ERVK-18Q9QC07 812 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 DCAF1Q9Y4B6 1507 aa4.04□□□□□ -1.76
SKP1-208ENST00000521216 CCDC69A6NI79 296 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 LRRTM2O43300 516 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 PNPP00491 289 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 FCGR3AP08637 254 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 MMP10P09238 476 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 ZNF18P17022 549 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 PITPNBP48739 271 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 CDKL1Q00532 357 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 UBXN1Q04323 297 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 CNPY1Q3B7I2 92 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 SLC25A30Q5SVS4 291 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 STEAP1BQ6NZ63 245 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 CDC42EP5Q6NZY7 148 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 RFWD3Q6PCD5 774 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 ABRAXAS1Q6UWZ7 409 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 CNTN4Q8IWV2 1026 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 RHOXF1Q8NHV9 184 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 PNPLA2Q96AD5 504 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 RAB3CQ96E17 227 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 RNF41Q9H4P4 317 aaPredicted RBP4.03□□□□□ -1.76
SKP1-208ENST00000521216 SEC14L4Q9UDX3 406 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 NARFQ9UHQ1 456 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 TSPAN16Q9UKR8 245 aa4.03□□□□□ -1.76
SKP1-208ENST00000521216 ZNF840PA6NDX5 716 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 RNF212BA8MTL3 300 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 TLR4O00206 839 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 FOSL2P15408 326 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 BCL3P20749 454 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 BRCC3P46736 316 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 RPS4XP62701 263 aaKnown RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 PPP1R8Q12972 351 aaKnown RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 PPP2R5CQ13362 524 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 MSLNQ13421 630 aaPredicted RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 PEX6Q13608 980 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 LASP1Q14847 261 aaKnown RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 ABRAXAS2Q15018 415 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 EXOSC7Q15024 291 aaKnown RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 CCL14Q16627 93 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 PCK2Q16822 640 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 HFEQ30201 348 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 EPC2Q52LR7 807 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 TCHHL1Q5QJ38 904 aaPredicted RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 PRAMEF7Q5VXH5 474 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 SEL1L3Q68CR1 1132 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 FGFRL1Q8N441 504 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 NEK11Q8NG66 645 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 ATP6V0A1Q93050 837 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 RAB39BQ96DA2 213 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 SPATA13Q96N96 652 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 PRAM1Q96QH2 718 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 JPH2Q9BR39 696 aaPredicted RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 DCTPP1Q9H773 170 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 PIGVQ9NUD9 493 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 ARMCX1Q9P291 453 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 COPS7AQ9UBW8 275 aa4.02□□□□□ -1.77
SKP1-208ENST00000521216 TDRKHQ9Y2W6 561 aaKnown RBP4.02□□□□□ -1.77
SKP1-208ENST00000521216 NOTCH3Q9UM47 2321 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 AFF2P51816 1311 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 GON4LQ3T8J9 2241 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 A0A087WWV3 80 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 SYCE3A1L190 88 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms