RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ADGRD1Q6QNK2 874 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 CYP20A1Q6UW02 462 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 GOLGA7Q7Z5G4 137 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 OR10G3Q8NGC4 313 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 RIT1Q92963 219 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ZNF559Q9BR84 538 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ZNF717Q9BY31 904 aaPredicted RBP13.98□□□□□ -0.17
CSMD1-207ENST00000520451 WWTR1Q9GZV5 400 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ZNF703Q9H7S9 590 aaPredicted RBP13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ZFP64Q9NPA5 681 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 SPRR3Q9UBC9 169 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 ASB4Q9Y574 426 aa13.98□□□□□ -0.17
CSMD1-207ENST00000520451 PHF3Q92576 2039 aaKnown RBP13.98□□□□□ -0.17
CSMD1-207ENST00000520451 HCFC1P51610 2035 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 EML6Q6ZMW3 1958 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 A0A096LPK6 155 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 A0A0G2JNJ9 132 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 A0A1W2PR48 441 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 HMX2A2RU54 273 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 UGDHO60701 494 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 LRATO95237 230 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 HOXD4P09016 255 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 FBXO45P0C2W1 286 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 RFPL3SP0C7P2 107 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 FAM58BPP0C7Q3 252 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 ENDOUP21128 410 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 SERPINB3P29508 390 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 ARL1P40616 181 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 ZFP36L2P47974 494 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 GUCY2DQ02846 1103 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CUL3Q13618 768 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 GTF2H2Q13888 395 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 EBPQ15125 230 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 PCBP2Q15366 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 TESK1Q15569 626 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 C1orf185Q5T7R7 199 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 MRM1Q6IN84 353 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 GTF2H2CQ6P1K8 395 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 DND1Q8IYX4 353 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CLYBLQ8N0X4 340 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 JSRP1Q96MG2 331 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 DDX31Q9H8H2 851 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 IPPKQ9H8X2 491 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 WDR41Q9HAD4 459 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 Q9UFV3 132 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 KCNN3Q9UGI6 736 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 RNF11Q9Y3C5 154 aa13.97□□□□□ -0.17
CSMD1-207ENST00000520451 TNPO3Q9Y5L0 923 aaKnown RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 CHCHD2Q9Y6H1 151 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-207ENST00000520451 ESYT3A0FGR9 886 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 LRRC3CA6NJW4 275 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 OR6C76A6NM76 312 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 KLK8O60259 260 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 KLHL2O95198 593 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 SIX3O95343 332 aaPredicted RBP13.96□□□□□ -0.17
CSMD1-207ENST00000520451 AIFM1O95831 613 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 GBAP04062 536 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 TYK2P29597 1187 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 ADH7P40394 386 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 PIK3CGP48736 1102 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 SERPINB8P50452 374 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 NEK2P51955 445 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 RIPPLY3P57055 190 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 SLC37A1P57057 533 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 MYBPHQ13203 477 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 TMEM200AQ86VY9 491 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 NUDT13Q86X67 352 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 L3MBTL4Q8NA19 623 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 GPR78Q96P69 363 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 DOHHQ9BU89 302 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 VPS11Q9H270 941 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 SLC6A15Q9H2J7 730 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 PROK2Q9HC23 129 aa13.96□□□□□ -0.17
CSMD1-207ENST00000520451 C2CD3Q4AC94 2353 aa13.96□□□□□ -0.18
CSMD1-207ENST00000520451 SPG11Q96JI7 2443 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
CSMD1-207ENST00000520451 CLDN9O95484 217 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
CSMD1-207ENST00000520451 CLPSP04118 112 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 SLC35E2P0CK97 266 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 GABRA1P14867 456 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 SLC7A5Q01650 507 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 CES4AQ5XG92 561 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 OR52E8Q6IFG1 317 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 SYT10Q6XYQ8 523 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 SPNS3Q6ZMD2 512 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 LIX1LQ8IVB5 337 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 TAGAPQ8N103 731 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 LRRC25Q8N386 305 aaPredicted RBP13.95□□□□□ -0.18
CSMD1-207ENST00000520451 C17orf53Q8N3J3 647 aaPredicted RBP13.95□□□□□ -0.18
CSMD1-207ENST00000520451 LIX1Q8N485 282 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 UCN3Q969E3 161 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 ATP6V1E2Q96A05 226 aa13.95□□□□□ -0.18
CSMD1-207ENST00000520451 CDK15Q96Q40 435 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms