RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 NME2P22392 152 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 MST1P26927 711 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 SERPINB3P29508 390 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 TRHRP34981 398 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 PTGER1P34995 402 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 SOX3P41225 446 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 XKP51811 444 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 FOXA1P55317 472 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 IGLV3-21P80748 117 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 SRSF1Q07955 248 aaKnown RBP eCLIP13.15□□□□□ -0.31e-7■■□□□ 13.6
VEGFA-221ENST00000520265 ZNF750Q32MQ0 723 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 TRABD2AQ86V40 505 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 FJX1Q86VR8 437 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 GALNT12Q8IXK2 581 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 SLC22A8Q8TCC7 542 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 ZNF721Q8TF20 911 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 FBXL20Q96IG2 436 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 FRMD6Q96NE9 622 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 ROPN1BQ9BZX4 212 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 ROPN1Q9HAT0 212 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 PSME2Q9UL46 239 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
VEGFA-221ENST00000520265 ZNF780BQ9Y6R6 833 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 RELNP78509 3460 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 C1orf226A1L170 272 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 KLRC4-KLRK1H3BQV0 150 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 UBFD1O14562 309 aaKnown RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 RGS16O15492 202 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PEX1O43933 1283 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 IL3P08700 152 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SLC35E2P0CK97 266 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SSTR4P31391 388 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 CASP6P55212 293 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 DNAJB13P59910 316 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 NAA20P61599 178 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 TBL3Q12788 808 aaKnown RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PCLAFQ15004 111 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 CLEC6AQ6EIG7 209 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 C9orf40Q8IXQ3 194 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PSD4Q8NDX1 1056 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 FAM13CQ8NE31 585 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 OR5M3Q8NGP4 307 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 EXOSC8Q96B26 276 aaKnown RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 APIPQ96GX9 242 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 BARD1Q99728 777 aaKnown RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 MECRQ9BV79 373 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 GIMAP4Q9NUV9 329 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 OXSMQ9NWU1 459 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 LGALS13Q9UHV8 139 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 MCM8Q9UJA3 840 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 ERRFI1Q9UJM3 462 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-221ENST00000520265 ENTPD4Q9Y227 616 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 DLGAP4Q9Y2H0 992 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PCDHGB6Q9Y5F9 930 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 PCDHA9Q9Y5H5 950 aa13.14□□□□□ -0.31
VEGFA-221ENST00000520265 H3BQF6 201 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 LRRTM2O43300 516 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 TRIM13O60858 407 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 CHEK2O96017 543 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 P04436 131 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 CPMP14384 443 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 PORP16435 677 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-221ENST00000520265 ABOP16442 354 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 TIA1P31483 386 aaKnown RBP eCLIP13.13□□□□□ -0.311e-11■■■□□ 15.1
VEGFA-221ENST00000520265 TDGF1P3P51864 188 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 PER3P56645 1201 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 SPRED3Q2MJR0 410 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 ZNF324BQ6AW86 544 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-221ENST00000520265 SLC48A1Q6P1K1 146 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 OPN5Q6U736 354 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 RTL4Q6ZR62 310 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 FAM47EQ6ZV65 393 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 GPALPP1Q8IXQ4 340 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 ADCY4Q8NFM4 1077 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 TM4SF18Q96CE8 201 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 UTS2RQ9UKP6 389 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-221ENST00000520265 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
VEGFA-221ENST00000520265 C2orf92A0A1B0GVN3 265 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 TMEM200CA6NKL6 621 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 CDK2AP1O14519 115 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-221ENST00000520265 UROSP10746 265 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms