RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 GLOD5A6NK44 160 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 ZNF682O95780 498 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SEMG1P04279 462 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 LYNP07948 512 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SMIM10L1P0DMW3 83 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 HOXB6P17509 224 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 ACP1P24666 158 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 BTN3A2P78410 334 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 EEF1A2Q05639 463 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 TGM3Q08188 693 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 VAC14Q08AM6 782 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SPIDRQ14159 915 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 GK3PQ14409 553 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 MLC1Q15049 377 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 GCNT6Q5T4J0 391 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 PHF19Q5T6S3 580 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 UGT2A3Q6UWM9 527 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 CBLL1Q75N03 491 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 EIF3MQ7L2H7 374 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 OR4D9Q8NGE8 314 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 TMBIM1Q969X1 311 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 ZBED6CLQ96FA7 236 aaPredicted RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 SMIM10Q96HG1 83 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 OSBPL11Q9BXB4 747 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 TMEM38AQ9H6F2 299 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 C8orf4Q9NR00 106 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 RPS6KA6Q9UK32 745 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 MRPS2Q9Y399 296 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 COL5A1P20908 1838 aaPredicted RBP13.65□□□□□ -0.22
CLN8-204ENST00000519254 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 URADA6NGE7 173 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 TMEM150CB9EJG8 249 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 D6RAR5 112 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 EI24O14681 340 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 PROM1O43490 865 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 B4GALT2O60909 372 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 GUCY1B2O75343 617 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 AIFM1O95831 613 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 CST1P01037 141 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 ZNF23P17027 643 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 TGM1P22735 817 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 MAGEA2P43356 314 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 GABRA4P48169 554 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 CDK9P50750 372 aaKnown RBP13.65□□□□□ -0.22
CLN8-204ENST00000519254 MRPS35P82673 323 aaKnown RBP13.65□□□□□ -0.22
CLN8-204ENST00000519254 HSPB3Q12988 150 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 SQSTM1Q13501 440 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 DEFB134Q4QY38 66 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 TMEM214Q6NUQ4 689 aaKnown RBP13.65□□□□□ -0.22
CLN8-204ENST00000519254 VTCN1Q7Z7D3 282 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 SLC41A2Q96JW4 573 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 AMDHD1Q96NU7 426 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 NEUROD4Q9HD90 331 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
CLN8-204ENST00000519254 CUL9Q8IWT3 2517 aa13.65□□□□□ -0.23
CLN8-204ENST00000519254 NINQ8N4C6 2090 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
CLN8-204ENST00000519254 ZSCAN9O15535 394 aaPredicted RBP13.64□□□□□ -0.23
CLN8-204ENST00000519254 GP1BAP07359 652 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 FOLR1P15328 257 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 NELFEP18615 380 aaKnown RBP13.64□□□□□ -0.23
CLN8-204ENST00000519254 RBBP4Q09028 425 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 TMEM154Q6P9G4 183 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 ABHD13Q7L211 337 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 CHERPQ8IWX8 916 aaKnown RBP13.64□□□□□ -0.23
CLN8-204ENST00000519254 D2HGDHQ8N465 521 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 KLHL6Q8WZ60 621 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 CNBD2Q96M20 576 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
CLN8-204ENST00000519254 MAGED1Q9Y5V3 778 aaPredicted RBP13.64□□□□□ -0.23
CLN8-204ENST00000519254 ZNF860A6NHJ4 632 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 TOX3O15405 576 aaPredicted RBP13.63□□□□□ -0.23
CLN8-204ENST00000519254 SRPX2O60687 465 aaPredicted RBP13.63□□□□□ -0.23
CLN8-204ENST00000519254 CBFA2T3O75081 653 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 AQP1P29972 269 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 PRIM2P49643 509 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 IST1P53990 364 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
CLN8-204ENST00000519254 SCARB2Q14108 478 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLN8-204ENST00000519254 STPG1Q5TH74 334 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 FKBP9P1Q75LS8 142 aa13.63□□□□□ -0.23
CLN8-204ENST00000519254 PRSS41Q7RTY9 318 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms