RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 TACR1P25103 407 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 LIMS1P48059 325 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 CEACAM20Q6UY09 585 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 RNF165Q6ZSG1 346 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 LRRC52Q8N7C0 313 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 EDEM1Q92611 657 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 HHIPQ96QV1 700 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 PPP1R16BQ96T49 567 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 GJD2Q9UKL4 321 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 A0A0U1RQF3 1178 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 J3KTA2 159 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 FPGTO14772 594 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 GREM1O60565 184 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 SDC3O75056 442 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 NIPSNAP2O75323 286 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 UGT2B7P16662 529 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 GIFP27352 417 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 RFC3P40938 356 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 OR1E2P47887 323 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 KCNJ3P48549 501 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ITKQ08881 620 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 TPBGQ13641 420 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 MICBQ29980 383 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 SLC36A2Q495M3 483 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ARTNQ5T4W7 220 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 B3GNTL1Q67FW5 361 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ABCG4Q9H172 646 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 SLC22A11Q9NSA0 550 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 OR6C2Q9NZP2 312 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 BTNL2Q9UIR0 455 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CLCA2Q9UQC9 943 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 COL16A1Q07092 1604 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF593O00488 134 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 LRATO95237 230 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 RASGRP1O95267 797 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 GASTP01350 101 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF124Q15973 351 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 SGCAQ16586 387 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 DUOXA1Q1HG43 343 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 GPRIN1Q7Z2K8 1008 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 C12orf40Q86WS4 652 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 PDZD9Q8IXQ8 264 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CAMKVQ8NCB2 501 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 B3GALNT2Q8NCR0 500 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 OR52I1Q8NGK6 324 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CD200R1Q8TD46 325 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CHST8Q9H2A9 424 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 SEC14L3Q9UDX4 400 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-208ENST00000519004 DSPPQ9NZW4 1301 aa12.89□□□□□ -0.35
PABPC1-208ENST00000519004 LCTP09848 1927 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MCRIP1C9JLW8 97 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 ULK1O75385 1050 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PAGE1O75459 146 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 OPN1SWP03999 348 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PTAFRP25105 342 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 GABRA5P31644 462 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PRMT2P55345 433 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 IL2P60568 153 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SELENOWP63302 87 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MC2RQ01718 297 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PTPRNQ16849 979 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 OR2G6Q5TZ20 316 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 AFMIDQ63HM1 303 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SLC25A25Q6KCM7 469 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MACC1Q6ZN28 852 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 TAC4Q86UU9 113 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 GPR135Q8IZ08 494 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 REPS2Q8NFH8 660 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MAL2Q969L2 176 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 C12orf66Q96MD2 445 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 ABCG8Q9H221 673 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SDHAF3Q9NRP4 125 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 DNAJC11Q9NVH1 559 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 UXTQ9UBK9 157 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 NDOR1Q9UHB4 597 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms