RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZNF763Q0D2J5 394 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF267Q14586 743 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF169Q14929 603 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 NR6A1Q15406 480 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SPRED3Q2MJR0 410 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 COLEC12Q5KU26 742 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CES4AQ5XG92 561 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 NOXRED1Q6NXP6 359 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 Q6ZSR9 355 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 TRIM42Q8IWZ5 723 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SAMD14Q8IZD0 417 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 MMP21Q8N119 569 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 BEST3Q8N1M1 668 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ARMC10Q8N2F6 343 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 HORMAD2Q8N7B1 307 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CATSPER1Q8NEC5 780 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 OR5L2Q8NGL0 311 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 OR2T11Q8NH01 316 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 OR8K3Q8NH51 312 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SUN3Q8TAQ9 357 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 BCAS4Q8TDM0 211 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF721Q8TF20 911 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 RIT1Q92963 219 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 KLHL29Q96CT2 875 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 FBXL20Q96IG2 436 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 NPAS2Q99743 824 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 UTP23Q9BRU9 249 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CNPPD1Q9BV87 410 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 OR8D2Q9GZM6 311 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 RABEP2Q9H5N1 569 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF395Q9H8N7 513 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 EHD3Q9NZN3 535 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 COPS7AQ9UBW8 275 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF223Q9UK11 482 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 UTS2RQ9UKP6 389 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CES1P1Q9UKY3 287 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 WBP11Q9Y2W2 641 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 TMED5Q9Y3A6 229 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 RAP2CQ9Y3L5 183 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 POLR3HQ9Y535 204 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CSAG2Q9Y5P2 127 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SCN2AQ99250 2005 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 COL6A6A6NMZ7 2263 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 GMNCA6NCL1 334 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 GABRR3A8MPY1 467 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 MAN1A2O60476 641 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 SKAP2O75563 359 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 LYPLA1O75608 230 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 SORBS2O94875 1100 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 FAM107AO95990 144 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 F10P00742 488 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 IGKV3-11P04433 115 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ATP1B1P05026 303 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 VIMP08670 466 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CPMP14384 443 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 PLA2G2AP14555 144 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 DDCP20711 480 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 NT5EP21589 574 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 FEN1P39748 380 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CD96P40200 585 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 TNFSF10P50591 281 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 RPL14P50914 215 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 SEC24CP53992 1094 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ERVK-8P63133 956 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 RNF4P78317 190 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 OC90Q02509 493 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 TLE1Q04724 770 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 DMTNQ08495 405 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 C2orf80Q0P641 193 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 BST1Q10588 318 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 TUBA3CQ13748 450 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ZSCAN26Q16670 478 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF750Q32MQ0 723 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 GALNTL6Q49A17 601 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ATP6AP1LQ52LC2 224 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 RFTN2Q52LD8 501 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 C6orf163Q5TEZ5 329 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ATG16L1Q676U5 607 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 FAM71E1Q6IPT2 247 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 RPUSD3Q6P087 351 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 TUBA3EQ6PEY2 450 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 DGAT2L6Q6ZPD8 337 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 IKBIPQ70UQ0 350 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CPLX4Q7Z7G2 160 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF781Q8N8C0 355 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF321PQ8N8H1 164 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 Q8NA96 180 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CDC26Q8NHZ8 85 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 RAB3IL1Q8TBN0 382 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 THAP3Q8WTV1 239 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CHMP6Q96FZ7 201 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 FCRL1Q96LA6 429 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 PPP3R2Q96LZ3 170 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF681Q96N22 645 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 C20orf27Q9GZN8 174 aa6.65□□□□□ -1.34
PDLIM5-215ENST00000511586 CCDC134Q9H6E4 229 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms