RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MSX1P28360 303 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 SOX18P35713 384 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 DNASE1L1P49184 302 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 RAP1GDS1P52306 607 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 HERVK_113P63132 956 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 ERVK-8P63133 956 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 TFF3Q07654 80 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FOXO1Q12778 655 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 TBL3Q12788 808 aaKnown RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 ASPHQ12797 758 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 TCHHL1Q5QJ38 904 aaPredicted RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 LIPJQ5W064 366 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 LETMD1Q6P1Q0 360 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 GSPT2Q8IYD1 628 aaKnown RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 OR2M7Q8NG81 312 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 OR8K3Q8NH51 312 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 LILRB4Q8NHJ6 448 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 SENP5Q96HI0 755 aaPredicted RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 SGCZQ96LD1 299 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 CENPKQ9BS16 269 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 ERVK-6Q9BXR3 956 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 DDX31Q9H8H2 851 aaKnown RBP10.07□□□□□ -0.8
RNF4-212ENST00000509258 SH2D2AQ9NP31 389 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 KCNJ16Q9NPI9 418 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 TNFRSF10DQ9UBN6 386 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 NFU1Q9UMS0 254 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 ERVK-19Q9WJR5 959 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 RNF6Q9Y252 685 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 AKAP6Q13023 2319 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 DOCK7Q96N67 2140 aa10.07□□□□□ -0.8
RNF4-212ENST00000509258 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 A8MT66 165 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 UGDHO60701 494 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 CLDN9O95484 217 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 INHBAP08476 426 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 FAM58BPP0C7Q3 252 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 SERPINB1P30740 379 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 SSTR4P31391 388 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 PHBP35232 272 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 PIGAP37287 484 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 CDH13P55290 713 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 PPIAP62937 165 aaKnown RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 DUSP2Q05923 314 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 BIKQ13323 160 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 ZNF791Q3KP31 576 aaPredicted RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 PIGGQ5H8A4 983 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 OPN5Q6U736 354 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 TMEM64Q6YI46 380 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 RTL4Q6ZR62 310 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 CCDC91Q7Z6B0 441 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 CLYBLQ8N0X4 340 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 GOLM1Q8NBJ4 401 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 SIMC1Q8NDZ2 872 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 MYRIPQ8NFW9 859 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 OR4F6Q8NGB9 312 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 OR5M3Q8NGP4 307 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 ZNF483Q8TF39 744 aaPredicted RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 FBXL20Q96IG2 436 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 ART5Q96L15 291 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 DGAT2Q96PD7 388 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 HBEGFQ99075 208 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 ZNF559Q9BR84 538 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 MRPL1Q9BYD6 325 aaKnown RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 TTTY12Q9BZ98 90 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 TXLNGYQ9BZA5 131 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNF4-212ENST00000509258 TUBA8Q9NY65 449 aaPredicted RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 MTRF1LQ9UGC7 380 aaKnown RBP10.06□□□□□ -0.8
RNF4-212ENST00000509258 KCNN3Q9UGI6 736 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 PCDHGA11Q9Y5H2 935 aa10.06□□□□□ -0.8
RNF4-212ENST00000509258 MPDZO75970 2070 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CCDC189A1A4V9 331 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 STX16-NPEPL1H3BU86 382 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 STX16O14662 325 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 TOXO94900 526 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 GPR75O95800 540 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 P04436 131 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 NR2F6P10588 404 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CHN1P15882 459 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 ALOX15P16050 662 aaPredicted RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 ENDOUP21128 410 aaKnown RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 CNR1P21554 472 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 PTX3P26022 381 aaPredicted RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 MAGEA5P43359 124 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CCNG1P51959 295 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 SLC37A1P57057 533 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 DUSP8Q13202 625 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CUL3Q13618 768 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 ZNF267Q14586 743 aaPredicted RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 UNC50Q53HI1 259 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 SGO1Q5FBB7 561 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CES4AQ5XG92 561 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 FRG2Q64ET8 278 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 FAM180BQ6P0A1 224 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms