RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 A0A0U1RQV5 110 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 LOC390937A0A1W2PQ73 354 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 A0A1W2PR77 199 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PLSCR5A0PG75 271 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 C1orf226A1L170 272 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SMCO2A6NFE2 343 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SERPINE3A8MV23 424 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANKRD66B4E2M5 251 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPIPA7E9PJI5 369 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 WWP2O00308 870 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PDXKO00764 312 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HAT1O14929 419 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPAA1O43292 621 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 LATO43561 262 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 LANCL1O43813 399 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SSX4O60224 188 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMPRSS11DO60235 418 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 RBBP9O75884 186 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 RNF8O76064 485 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 NOL4O94818 638 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CRYABP02511 175 aaKnown RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HIST1H2AGP0C0S8 130 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 GOLGA8HP0CJ92 632 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPIPA8P0DM63 369 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPIAL4FP0DN26 164 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 LYL1P12980 280 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF23P17027 643 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 POLR2CP19387 275 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACADLP28330 430 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 DUSP1P28562 367 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CD80P33681 288 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 RYKP34925 604 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPP1R2P41236 205 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC1A4P43007 532 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PTGFRP43088 359 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CDX1P47902 265 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CSNK1EP49674 416 aaKnown RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCR4P51679 360 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 RAP1GDS1P52306 607 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 MTCP1P56278 107 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 RAB4BP61018 213 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 POLR2GP62487 172 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 XIAPP98170 497 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CNTN2Q02246 1040 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SULT2A1Q06520 285 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FOXM1Q08050 763 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 IL10RBQ08334 325 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HYAL1Q12794 435 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TGFBIQ15582 683 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRIP10Q15642 601 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADPRMQ3LIE5 342 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 AASDHQ4L235 1098 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TCHHL1Q5QJ38 904 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPP1R2P3Q6NXS1 205 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CYB5D1Q6P9G0 228 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FBXO46Q6PJ61 603 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CBLN3Q6UW01 205 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM151BQ6UXP7 276 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 C9orf47Q6ZRZ4 202 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PIP4P1Q86T03 277 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADIPOR2Q86V24 386 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPBP1Q86WP2 473 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SFTPA1Q8IWL2 248 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 NELFCDQ8IXH7 590 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZDHHC23Q8IYP9 409 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ARHGAP24Q8N264 748 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCDC197Q8NCU1 140 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF548Q8NEK5 533 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ENGASEQ8NFI3 743 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PROKR2Q8NFJ6 384 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR14L1PQ8NHC6 308 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 UBA3Q8TBC4 463 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 UBTD2Q8WUN7 234 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAR1Q8WVX9 515 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 SPRYD4Q8WW59 207 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PIGBQ92521 554 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HAS2Q92819 552 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CELF1Q92879 486 aaKnown RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 MAP4K1Q92918 833 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 HIST1H2ACQ93077 130 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADIPOR1Q96A54 375 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 MRGPRFQ96AM1 343 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FBXL8Q96CD0 374 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ECHDC3Q96DC8 303 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 OTUB2Q96DC9 234 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF274Q96GC6 653 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 COQ2Q96H96 371 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 DNAJC1Q96KC8 554 aaKnown RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 C4orf36Q96KX1 117 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM20AQ96MK3 541 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCT8L2Q96SF2 557 aa3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 PRMT1Q99873 361 aaKnown RBP3.36□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM110AQ9BQ89 295 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms