RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 NINQ8N4C6 2090 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 C17orf105B2RV13 164 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 ERVH48-1M5A8F1 160 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 OR10H2O60403 315 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 KLHL41O60662 606 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 ERAL1O75616 437 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 DNAJB5O75953 348 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 CPMP14384 443 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 COX7A2P14406 83 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 PORP16435 677 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 TNNI3P19429 210 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 EPHA3P29320 983 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 RPL3P39023 403 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 CCL11P51671 97 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 GPR143P51810 404 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 POLE2P56282 527 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 C21orf58P58505 322 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 PDE7AQ13946 482 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 CEBPEQ15744 281 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 JMJD6Q6NYC1 403 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 TICAM1Q8IUC6 712 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 FAM9CQ8IZT9 166 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 CEP70Q8NHQ1 597 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 STON2Q8WXE9 905 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 EXOSC8Q96B26 276 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 MTERF3Q96E29 417 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 CNRIP1Q96F85 164 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 PCDHGA9Q9Y5G4 932 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-208ENST00000504489 GOLGA8QA0A0J9YX86 632 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 A0A1W2PS29 197 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 GOLGA8OA6NCC3 632 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 GOLGA8NF8WBI6 632 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 AKAP10O43572 662 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DYRK3O43781 588 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 LRATO95237 230 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DDAH2O95865 285 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ATP1B1P05026 303 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 CELA2AP08217 269 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ALDOCP09972 364 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ITGAMP11215 1152 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 G6PDP11413 515 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 PRPS1L1P21108 318 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ITGA3P26006 1051 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 MPIP34949 423 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 HPCAL1P37235 193 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 IDH3AP50213 366 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DIO3P55073 304 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 CLDN8P56748 225 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 PTGR1Q14914 329 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 SPRED3Q2MJR0 410 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ZNF750Q32MQ0 723 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 IRAK1BP1Q5VVH5 260 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 DGAT2L6Q6ZPD8 337 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 R3HCC1LQ7Z5L2 792 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 RIMKLAQ8IXN7 391 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 APCDD1LQ8NCL9 501 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 FDCSPQ8NFU4 85 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 CLHC1Q8NHS4 586 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ELP5Q8TE02 316 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 PSMF1Q92530 271 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 RIT1Q92963 219 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 VMP1Q96GC9 406 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 FBXL20Q96IG2 436 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 THOC3Q96J01 351 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ART5Q96L15 291 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 SIKE1Q9BRV8 207 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 SLC25A23Q9BV35 468 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ATP6V1HQ9UI12 483 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ENTPD4Q9Y227 616 aa11.1□□□□□ -0.63
PDLIM5-208ENST00000504489 ATRXP46100 2492 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 A6NL46 340 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 GABRR3A8MPY1 467 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 MYO1GB0I1T2 1018 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 ANKRD28O15084 1053 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 SCAMP2O15127 329 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 IGKV3-11P04433 115 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 SFTPCP11686 197 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 CLCN2P51788 898 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 AQP5P55064 265 aa11.09□□□□□ -0.63
PDLIM5-208ENST00000504489 DUSP2Q05923 314 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms