RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TTC23LQ6PF05 361 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 POMZP3Q6PJE2 187 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 ABRAXAS1Q6UWZ7 409 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 UNC5DQ6UXZ4 953 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 WASH2PQ6VEQ5 465 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 CYHR1Q6ZMK1 362 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 PLEKHM3Q6ZWE6 761 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 PIWIL4Q7Z3Z4 852 aaKnown RBP4.79□□□□□ -1.64
FXN-205ENST00000498653 EXOC3L1Q86VI1 746 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 VRK3Q8IV63 474 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 TRIM48Q8IWZ4 208 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 SPATA6LQ8N4H0 392 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 LILRA3Q8N6C8 439 aaPredicted RBP4.79□□□□□ -1.64
FXN-205ENST00000498653 BANPQ8N9N5 519 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 CFAP61Q8NHU2 1237 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 KCTD4Q8WVF5 259 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 ANKRD49Q8WVL7 239 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 NXNL1Q96CM4 212 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 TLCD1Q96CP7 247 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 CXorf40BQ96DE9 158 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 APOPT1Q96IL0 206 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 UBXN10Q96LJ8 280 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 RMDN2Q96LZ7 410 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 C12orf66Q96MD2 445 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 C17orf62Q9BQA9 187 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 ANGPTL4Q9BY76 406 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 TRIM54Q9BYV2 358 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 KLHL25Q9H0H3 589 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 WWP1Q9H0M0 922 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 OR52A5Q9H2C5 316 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
FXN-205ENST00000498653 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 MED4Q9NPJ6 270 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 PNPLA3Q9NST1 481 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 GPATCH2Q9NW75 528 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 MKS1Q9NXB0 559 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.79□□□□□ -1.64
FXN-205ENST00000498653 GRID1Q9ULK0 1009 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 PSMD13Q9UNM6 376 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 EIF3LQ9Y262 564 aaKnown RBP4.79□□□□□ -1.64
FXN-205ENST00000498653 HEBP2Q9Y5Z4 205 aa4.79□□□□□ -1.64
FXN-205ENST00000498653 MUC4Q99102 2169 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SH3D21A4FU49 640 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SYCE1LA8MT33 242 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 GFYI3L273 518 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CDC7O00311 574 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 PRPF4O43172 522 aaKnown RBP eCLIP4.78□□□□□ -1.64
FXN-205ENST00000498653 ZBTB14O43829 449 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 KDM1AO60341 852 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TMCC2O75069 709 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SMIM24O75264 130 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SPAG7O75391 227 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 PSIP1O75475 530 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 UBOX5O94941 541 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SYF2O95926 243 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 VIPP01282 170 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CATP04040 527 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 S100BP04271 92 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ENO2P09104 434 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 TAC1P20366 129 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 HIST1H2ADP20671 130 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 RPL10P27635 214 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 LOXP28300 417 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ACADLP28330 430 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 NDUFS1P28331 727 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 EEF1DP29692 281 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ARFIP2P53365 341 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 DLG1Q12959 904 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SP140Q13342 867 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 RPE65Q16518 533 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CCDC153Q494R4 210 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CMPK2Q5EBM0 449 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TECRLQ5HYJ1 363 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 C1orf189Q5VU69 101 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 B3GNT6Q6ZMB0 384 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 SH2D5Q6ZV89 423 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 FRA10AC1Q70Z53 315 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ADAMTSL2Q86TH1 951 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 GPSM1Q86YR5 675 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 DCUN1D3Q8IWE4 304 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 KBTBD2Q8IY47 623 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TBC1D21Q8IYX1 336 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CENPLQ8N0S6 344 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 AMER2Q8N7J2 671 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 ANKRD42Q8N9B4 389 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CCDC63Q8NA47 563 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 NAXEQ8NCW5 288 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 RHEBL1Q8TAI7 183 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 STAG3L4Q8TBR4 150 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MAGEC3Q8TD91 643 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MCOLN3Q8TDD5 553 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 GATAD1Q8WUU5 269 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TFGQ92734 400 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ANAPC16Q96DE5 110 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms