RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 PIGTQ969N2 578 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 PTCD3Q96EY7 689 aaKnown RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 CFAP36Q96G28 342 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 WDYHV1Q96HA8 205 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 GNRHR2Q96P88 292 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 KRT12Q99456 494 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 PIP5K1AQ99755 562 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 ERVK-6Q9BXR3 956 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 UGT2B28Q9BY64 529 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 RPF2Q9H7B2 306 aaKnown RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 CALHM2Q9HA72 323 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 DNAJC11Q9NVH1 559 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 WWOXQ9NZC7 414 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 ANKRD33BA6NCL7 494 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 TP53I11O14683 189 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 PRAMEF4O60810 478 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 SH3BGRLO75368 114 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 ALOX15P16050 662 aaPredicted RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 SSR2P43308 183 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 BIKQ13323 160 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF267Q14586 743 aaPredicted RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 EBPQ15125 230 aaKnown RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 RPS6KA2Q15349 733 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 TGFBIQ15582 683 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 HIST2H2ACQ16777 129 aaPredicted RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 EIPR1Q53HC9 387 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 FBXO48Q5FWF7 155 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 NHSL2Q5HYW2 709 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 PAGE2BQ5JRK9 111 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 DCST1Q5T197 706 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 PRAMEF9Q5VWM5 478 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 BICRALQ6AI39 1079 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 HIST2H2AA3Q6FI13 130 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 YTHDF3Q7Z739 585 aaKnown RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 PACS2Q86VP3 889 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 IGDCC3Q8IVU1 814 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 BBOF1Q8ND07 529 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 TRIM58Q8NG06 486 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 ANKRD49Q8WVL7 239 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 ABTB1Q969K4 478 aaPredicted RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 MS4A14Q96JA4 679 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 RILPQ96NA2 401 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 TMEM79Q9BSE2 394 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 EFCAB11Q9BUY7 163 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 MS4A8Q9BY19 250 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 PHACTR1Q9C0D0 580 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 UBQLN3Q9H347 655 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 CNOT10Q9H9A5 744 aaKnown RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
CCDC58-207ENST00000498466 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 C15orf41Q9Y2V0 281 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 MPDZO75970 2070 aa12.74□□□□□ -0.37
CCDC58-207ENST00000498466 FAM95CA0A1B0GW59 222 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TRIM64BA6NI03 449 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 CAPN14A8MX76 684 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 SAP18O00422 153 aaKnown RBP12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TAPBPO15533 448 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 OR10H2O60403 315 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 SNX4O95219 450 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TGFB1P01137 390 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 CYP4B1P13584 511 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 CD22P20273 847 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 HSPA7P48741 367 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 FBXW4P57775 412 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 FOXF2Q12947 444 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 LAPTM5Q13571 262 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 PPP1R7Q15435 360 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 PDK4Q16654 411 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 CYP1B1Q16678 543 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TMEM35AQ53FP2 167 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-207ENST00000498466 HP1BP3Q5SSJ5 553 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-207ENST00000498466 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 ST13P4Q8IZP2 240 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TCAIMQ8N3R3 496 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 TANKQ92844 425 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 ESAMQ96AP7 390 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 PERPQ96FX8 193 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 PLAC1Q9HBJ0 212 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
CCDC58-207ENST00000498466 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
CCDC58-207ENST00000498466 OR6C76A6NM76 312 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 STK16O75716 305 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 SCELO95171 688 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 PCNAP12004 261 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 TLX1P31314 330 aaPredicted RBP12.72□□□□□ -0.37
CCDC58-207ENST00000498466 SLC37A1P57057 533 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 TAS2R39P59534 338 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms