RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SPRED3Q2MJR0 410 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 MAVSQ7Z434 540 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 GALNT12Q8IXK2 581 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 NATD1Q8N6N6 113 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 NFAM1Q8NET5 270 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 PTPMT1Q8WUK0 201 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 STON2Q8WXE9 905 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 TTC9Q92623 222 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 PPWD1Q96BP3 646 aaKnown RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CNRIP1Q96F85 164 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CCDC28BQ9BUN5 200 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 SLC25A23Q9BV35 468 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 DPY30Q9C005 99 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 OR8D2Q9GZM6 311 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 TCF7L2Q9NQB0 619 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 ATAD3AQ9NVI7 634 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 GPR83Q9NYM4 423 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 SH3BP4Q9P0V3 963 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 TEKT2Q9UIF3 430 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 TUBD1Q9UJT1 453 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 PCDHGA9Q9Y5G4 932 aaKnown RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CELSR3Q9NYQ7 3312 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CCDC88CQ9P219 2028 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 SCAMP2O15127 329 aaKnown RBP15.96■□□□□ 0.15
HDAC6-235ENST00000495515 CEACAM4O75871 244 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 DNAJB5O75953 348 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 IDO1P14902 403 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 IDH3AP50213 366 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 PGDP52209 483 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 DIO3P55073 304 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 C21orf58P58505 322 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 Q0VFX4 171 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 PDE7AQ13946 482 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 GSTA3Q16772 222 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 AGAP7PQ5VUJ5 663 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 OR1N1Q8NGS0 311 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 ZFP28Q8NHY6 868 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 WBP1Q96G27 269 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 FBXL20Q96IG2 436 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 ZNF681Q96N22 645 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 AGAP4Q96P64 663 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 KCNK13Q9HB14 408 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 NPHS2Q9NP85 383 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 FGFR1OP2Q9NVK5 253 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 ATP6V1HQ9UI12 483 aa15.96■□□□□ 0.15
HDAC6-235ENST00000495515 EXO1Q9UQ84 846 aaKnown RBP15.96■□□□□ 0.15
HDAC6-235ENST00000495515 MASP2O00187 686 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 UBDO15205 165 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 PDPK1O15530 556 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 SLITRK5O94991 958 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CLNS1AP54105 237 aaKnown RBP15.95■□□□□ 0.14
HDAC6-235ENST00000495515 KCNAB2Q13303 367 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF267Q14586 743 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CEBPEQ15744 281 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 LSM12Q3MHD2 195 aaKnown RBP15.95■□□□□ 0.14
HDAC6-235ENST00000495515 LINC00303Q3SY05 128 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CRB2Q5IJ48 1285 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CPTPQ5TA50 214 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CCDC116Q8IYX3 515 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 SLC5A8Q8N695 610 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 FDCSPQ8NFU4 85 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 SLC2A12Q8TD20 617 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 ELP5Q8TE02 316 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 NCLNQ969V3 563 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 SENP5Q96HI0 755 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-235ENST00000495515 OR52B2Q96RD2 323 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CNPPD1Q9BV87 410 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 DEFB126Q9BYW3 111 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 CXorf21Q9HAI6 301 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 AIG1Q9NVV5 245 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 DCTN4Q9UJW0 460 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 PCDHGB7Q9Y5F8 929 aa15.95■□□□□ 0.14
HDAC6-235ENST00000495515 GABRR3A8MPY1 467 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 MYO1GB0I1T2 1018 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 DDAH2O95865 285 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ITGAMP11215 1152 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 NCBP2P52298 156 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC6-235ENST00000495515 IRX1P78414 480 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-235ENST00000495515 MAP4K2Q12851 820 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 DPY19L1Q2PZI1 675 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF750Q32MQ0 723 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 HSDL2Q6YN16 418 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 APCDD1LQ8NCL9 501 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 OR5L2Q8NGL0 311 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 BRIX1Q8TDN6 353 aaKnown RBP15.94■□□□□ 0.14
HDAC6-235ENST00000495515 TM9SF4Q92544 642 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ERP27Q96DN0 273 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ZBED6CLQ96FA7 236 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-235ENST00000495515 RILPQ96NA2 401 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 UBL7Q96S82 380 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ZBTB18Q99592 522 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 BRINP2Q9C0B6 783 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ABI3Q9P2A4 366 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 ERVK-19Q9WJR5 959 aa15.94■□□□□ 0.14
HDAC6-235ENST00000495515 A0A0G2JND7 137 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 TRBV11-1A0A0K0K1C0 115 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 A0A1W2PS29 197 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 A8MUI8 341 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 BCAS2O75934 225 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ZFAND5O76080 213 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms