RNA–Protein interactions for RNA: ENST00000495487.1

PCMT1-210, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-210	ENST00000495487	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	FAM187A	A6NFU0	413 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PLPP1	O14494	284 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	DVL2	O14641	736 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	TP53I11	O14683	189 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PROM1	O43490	865 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	KERA	O60938	352 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PRKRA	O75569	313 aa	Known RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CTAG2	O75638	210 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	GPR75	O95800	540 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	FBXO45	P0C2W1	286 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ENDOU	P21128	410 aa	Known RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PTX3	P26022	381 aa	Predicted RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CRABP2	P29373	138 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	GMPR	P36959	345 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PIK3CB	P42338	1070 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PCDH1	Q08174	1060 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ADGRD1	Q6QNK2	874 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CYP20A1	Q6UW02	462 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	LYPD8	Q6UX82	237 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	MAATS1	Q7Z4T9	603 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CMC1	Q7Z7K0	106 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	TAGAP	Q8N103	731 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	UBTD2	Q8WUN7	234 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	DIO2	Q92813	273 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	NINJ1	Q92982	152 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	REPS1	Q96D71	796 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ATOH8	Q96SQ7	321 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	FOXC2	Q99958	501 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	GPATCH1	Q9BRR8	931 aa	Known RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	WWTR1	Q9GZV5	400 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ACTR8	Q9H981	624 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	LYAR	Q9NX58	379 aa	Known RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	PCDHGA11	Q9Y5H2	935 aa		13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	NIPBL	Q6KC79	2804 aa	eCLIP	13.96	□□□□□ -0.17
PCMT1-210	ENST00000495487	ARHGAP21	Q5T5U3	1957 aa		13.96	□□□□□ -0.18
PCMT1-210	ENST00000495487	C2orf92	A0A1B0GVN3	265 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	GLOD5	A6NK44	160 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	OR6C76	A6NM76	312 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	SYCE1L	A8MT33	242 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	CAPN14	A8MX76	684 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	AHRR	A9YTQ3	701 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	SYT5	O00445	386 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	TRAPPC6A	O75865	159 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	FAM155B	O75949	473 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	LRAT	O95237	230 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	SLC35E2B	P0CK96	405 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	BMP5	P22003	454 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	GDF1	P27539	372 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	ARFIP1	P53367	373 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	HNRNPH2	P55795	449 aa	Known RBP	13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	GPX6	P59796	221 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	RPS13	P62277	151 aa	Known RBP	13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	PPP2R2A	P63151	447 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	DLG1	Q12959	904 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	SPRED3	Q2MJR0	410 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	KBTBD12	Q3ZCT8	623 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	TBCEL	Q5QJ74	424 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	LIPJ	Q5W064	366 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	HLA-DQA1	Q5Y7H0	255 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	CCDC25	Q86WR0	208 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	ZNF597	Q96LX8	424 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	KCNF1	Q9H3M0	494 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	PROK2	Q9HC23	129 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	DMRT3	Q9NQL9	472 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	ACOT9	Q9Y305	439 aa		13.95	□□□□□ -0.18
PCMT1-210	ENST00000495487	NCKAP5	O14513	1909 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	LRRC3C	A6NJW4	275 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	WASHC1	A8K0Z3	465 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	C1QA	P02745	245 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	FAM58BP	P0C7Q3	252 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	NR2F6	P10588	404 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	GFAP	P14136	432 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	DNASE1	P24855	282 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	SLC37A1	P57057	533 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	DUSP8	Q13202	625 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	EBP	Q15125	230 aa	Known RBP	13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	7e-9	■■■■■ 29.6
PCMT1-210	ENST00000495487	NTRK2	Q16620	822 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	NXNL1	Q96CM4	212 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	RMND5B	Q96G75	393 aa	Predicted RBP	13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	TMUB1	Q9BVT8	246 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	RASSF1	Q9NS23	344 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	IGSF5	Q9NSI5	407 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	ZNF358	Q9NW07	568 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	CRIM1	Q9NZV1	1036 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	MTRF1L	Q9UGC7	380 aa	Known RBP	13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	ST6GALNAC2	Q9UJ37	374 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	CNOT11	Q9UKZ1	510 aa	Known RBP	13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	TSC22D4	Q9Y3Q8	395 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	ASB4	Q9Y574	426 aa		13.94	□□□□□ -0.18
PCMT1-210	ENST00000495487	AKAP6	Q13023	2319 aa		13.93	□□□□□ -0.18
PCMT1-210	ENST00000495487	FREM3	P0C091	2139 aa		13.93	□□□□□ -0.18
PCMT1-210	ENST00000495487	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.93	□□□□□ -0.18

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