RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 NRGNQ92686 78 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 RGMAQ96B86 450 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 GPR22Q99680 433 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 CENPKQ9BS16 269 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
NUP58-214ENST00000495460 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
NUP58-214ENST00000495460 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 IQANK1A0A1B0GTG1 560 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 G3V3Y1 287 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 TP53I11O14683 189 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 FGF17O60258 216 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 GPR75O95800 540 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 IL2RAP01589 272 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 HPNP05981 417 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 ALOX15P16050 662 aaPredicted RBP13.79□□□□□ -0.2
NUP58-214ENST00000495460 STMN1P16949 149 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 PTX3P26022 381 aaPredicted RBP13.79□□□□□ -0.2
NUP58-214ENST00000495460 HSPA7P48741 367 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 SLC37A1P57057 533 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 ADAM8P78325 824 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 NSUN5P2Q63ZY6 315 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 TMEM198Q66K66 360 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 METTL2BQ6P1Q9 378 aaKnown RBP13.79□□□□□ -0.2
NUP58-214ENST00000495460 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 PAMR1Q6UXH9 720 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 SLC29A4Q7RTT9 530 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 WDR53Q7Z5U6 358 aaPredicted RBP13.79□□□□□ -0.2
NUP58-214ENST00000495460 CCDC91Q7Z6B0 441 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 TAGAPQ8N103 731 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 LIX1Q8N485 282 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 ZNF441Q8N8Z8 693 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 UBTD2Q8WUN7 234 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 HSPBAP1Q96EW2 488 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 KRT12Q99456 494 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 TIMP4Q99727 224 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 CPNE1Q99829 537 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
NUP58-214ENST00000495460 UBQLN3Q9H347 655 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 EXO5Q9H790 373 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 CBLCQ9ULV8 474 aa13.79□□□□□ -0.2
NUP58-214ENST00000495460 NCF1BA6NI72 391 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 NCF1CA8MVU1 366 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
NUP58-214ENST00000495460 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 UGDHO60701 494 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 RAF1P04049 648 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 SLC35E2BP0CK96 405 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 NCF1P14598 390 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 BUD31P41223 144 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 MSH2P43246 934 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 RPL21P46778 160 aaKnown RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 EEF1A1P68104 462 aaKnown RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 DR1Q01658 176 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 CRYZQ08257 329 aaKnown RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 FOXD4Q12950 439 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 SLAMF1Q13291 335 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 CUL3Q13618 768 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 OR4D1Q15615 310 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 ACSF3Q4G176 576 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 EEF1A1P5Q5VTE0 462 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 LIPJQ5W064 366 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 MRM1Q6IN84 353 aaKnown RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 ADNP2Q6IQ32 1131 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 SNX31Q8N9S9 440 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 RELL2Q8NC24 303 aaPredicted RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 CDKL2Q92772 493 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 ZFP3Q96NJ6 502 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 UCN2Q96RP3 112 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 WWTR1Q9GZV5 400 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 CD274Q9NZQ7 290 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 MTO1Q9Y2Z2 717 aaKnown RBP13.78□□□□□ -0.2
NUP58-214ENST00000495460 PCDHGA11Q9Y5H2 935 aa13.78□□□□□ -0.2
NUP58-214ENST00000495460 MBD3L4A6NDZ8 208 aaPredicted RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 MBD3L3A6NE82 208 aaPredicted RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 MBD3L5A6NJ08 208 aaPredicted RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 CCDC188H7C350 402 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 K7EPI3 171 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 GSTA2P09210 222 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 NAGAP17050 411 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 HOXC12P31275 282 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 UQCRC1P31930 480 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 OPRM1P35372 400 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 SSR2P43308 183 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 TMED10P49755 219 aaKnown RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 DGKQP52824 942 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 RPP38P78345 283 aaKnown RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 TNFRSF17Q02223 184 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.21
NUP58-214ENST00000495460 DUSP8Q13202 625 aa13.77□□□□□ -0.21
NUP58-214ENST00000495460 EBPQ15125 230 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms