RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SMC6Q96SB8 1091 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PAFAH2Q99487 392 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 UCK2Q9BZX2 261 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 WWTR1Q9GZV5 400 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NOL11Q9H8H0 719 aaKnown RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 DDX31Q9H8H2 851 aaKnown RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SACM1LQ9NTJ5 587 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SPRR3Q9UBC9 169 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PHF11Q9UIL8 331 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PCTPQ9UKL6 214 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PCDHGA11Q9Y5H2 935 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SPACA6W5XKT8 324 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 ACANP16112 2415 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 PGRMC2O15173 223 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 UGDHO60701 494 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 FAM58BPP0C7Q3 252 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 COX7A2P14406 83 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 TSPAN8P19075 237 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CNR1P21554 472 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 SSTR4P31391 388 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CUL3Q13618 768 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 MEX3BQ6ZN04 569 aaKnown RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 GK5Q6ZS86 529 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CCDC91Q7Z6B0 441 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 SLC22A16Q86VW1 577 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 NUDT13Q86X67 352 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 RELL1Q8IUW5 271 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 ST13P4Q8IZP2 240 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 FAM109AQ8N4B1 249 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF441Q8N8Z8 693 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 OR10G3Q8NGC4 313 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CA5BP1Q8WTZ4 195 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 DCAKDQ8WVC6 231 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 TANKQ92844 425 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 FAM173AQ9BQD7 235 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 TP63Q9H3D4 680 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF703Q9H7S9 590 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 IL1RL2Q9HB29 575 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 FARSBQ9NSD9 589 aaKnown RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 LYARQ9NX58 379 aaKnown RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 MS4A12Q9NXJ0 267 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 ADGRE2Q9UHX3 823 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 DTX4Q9Y2E6 619 aa10.73□□□□□ -0.69
VTI1A-208ENST00000494728 CHCHD2Q9Y6H1 151 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-208ENST00000494728 A0A1B0GVC2 190 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ATP6AP2A0A1C7CYW4 349 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 KDM4EB2RXH2 506 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ACOT7O00154 380 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ATP6AP2O75787 350 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 URI1O94763 535 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 CLDN9O95484 217 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 GPR75O95800 540 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 RPS17P08708 135 aaKnown RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 FBXO45P0C2W1 286 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 PTX3P26022 381 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 GCAP28676 217 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 SOX18P35713 384 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ADH7P40394 386 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 BUD31P41223 144 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 DUSP2Q05923 314 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 DUSP8Q13202 625 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF267Q14586 743 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 HYAL4Q2M3T9 481 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 GXYLT1Q4G148 440 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 TCHHL1Q5QJ38 904 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 NDUFAF5Q5TEU4 345 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 BICRALQ6AI39 1079 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 LETMD1Q6P1Q0 360 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 OPN5Q6U736 354 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 TMEM151AQ8N4L1 468 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 MMGT1Q8N4V1 131 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 SIMC1Q8NDZ2 872 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 PAQR8Q8TEZ7 354 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 SGCZQ96LD1 299 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 HBEGFQ99075 208 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 SLC6A15Q9H2J7 730 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 CXorf21Q9HAI6 301 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF225Q9UK10 706 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 CNOT11Q9UKZ1 510 aaKnown RBP10.72□□□□□ -0.69
VTI1A-208ENST00000494728 ABCA4P78363 2273 aa10.72□□□□□ -0.69
VTI1A-208ENST00000494728 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 CCDC189A1A4V9 331 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 TRIM49D1C9J1S8 452 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 STX16-NPEPL1H3BU86 382 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 FOXE1O00358 373 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-208ENST00000494728 AQP7O14520 342 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 STX16O14662 325 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 OR10H2O60403 315 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 TOXO94900 526 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 SEMA3DO95025 777 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 P04436 131 aa10.71□□□□□ -0.69
VTI1A-208ENST00000494728 INHBAP08476 426 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms