RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	ZNF577	Q9BSK1	485 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TPPP3	Q9BW30	176 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	IDI2	Q9BXS1	227 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	NLN	Q9BYT8	704 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RMND5A	Q9H871	391 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	COG4	Q9H9E3	785 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	BRF2	Q9HAW0	419 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ASCL3	Q9NQ33	180 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	PNPLA3	Q9NST1	481 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ABCB8	Q9NUT2	735 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	TAS2R1	Q9NYW7	299 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	DLGAP2	Q9P1A6	1054 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	UVRAG	Q9P2Y5	699 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CLEC2D	Q9UHP7	191 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	DNAJC12	Q9UKB3	198 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	RPH3AL	Q9UNE2	315 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	ARL2BP	Q9Y2Y0	163 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	AAR2	Q9Y312	384 aa	Known RBP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CLUH	O75153	1309 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	UBE4B	O95155	1302 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	CUX2	O14529	1486 aa		4.35	□□□□□ -1.71
CCDC66-222	ENST00000494672	C2orf92	A0A1B0GVN3	265 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	URAD	A6NGE7	173 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF729	A6NN14	1252 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672		A8MV72	311 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CCRL2	O00421	344 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	STX16	O14662	325 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRRG1	O14668	218 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TNPO2	O14787	897 aa	Known RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	WNT9B	O14905	357 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TOX3	O15405	576 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC31A2	O15432	143 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	NUPL2	O15504	423 aa	Known RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PPIP5K2	O43314	1243 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	AQP9	O43315	295 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	COCH	O43405	550 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CST8	O60676	142 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	HSF2BP	O75031	334 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	RGS11	O94810	467 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TGFA	P01135	160 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TNNC2	P02585	160 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TK1	P04183	234 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	IFNA6	P05013	189 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PCCB	P05166	539 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CLEC3B	P05452	202 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CHRM4	P08173	479 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SERPINA6	P08185	405 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SUPT20HL2	P0C7V6	817 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	STAG3L2	P0CL84	134 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	RNF224	P0DH78	156 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR8G3P	P0DMU2	310 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	THRB	P10828	461 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	LAMP2	P13473	410 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF8	P17098	575 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ERCC2	P18074	760 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	MSH3	P20585	1137 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	HNF1A	P20823	631 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PTAFR	P25105	342 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	S100P	P25815	95 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CRABP1	P29762	137 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CCND2	P30279	289 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	LCN1	P31025	176 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	HOXC8	P31273	242 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDC34	P49427	236 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	LIG4	P49917	911 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SMS	P52788	366 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	MAPK12	P53778	367 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ACTR2	P61160	394 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	REEP5	Q00765	189 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	FLI1	Q01543	452 aa	Predicted RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SCN1B	Q07699	218 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC3A1	Q07837	685 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TEF	Q10587	303 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	OVGP1	Q12889	678 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	BAMBI	Q13145	260 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLA	Q13239	276 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	MAB21L1	Q13394	359 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TNFAIP1	Q13829	316 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	POU6F1	Q14863	301 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC5A12	Q1EHB4	618 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZRANB3	Q5FWF4	1079 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	EOGT	Q5NDL2	527 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	BEND3	Q5T5X7	828 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	LRRC38	Q5VT99	294 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	CES5A	Q6NT32	575 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ADAM5	Q6NVV9	412 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TTC27	Q6P3X3	843 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TSSK4	Q6SA08	328 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PLEKHG7	Q6ZR37	379 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	PXK	Q7Z7A4	578 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	DPPA2	Q7Z7J5	298 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	SMIM29	Q86T20	159 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	FOXRED2	Q8IWF2	684 aa		4.34	□□□□□ -1.71
CCDC66-222	ENST00000494672	ADSSL1	Q8N142	457 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms