RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CCDC63Q8NA47 563 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 B3GNT7Q8NFL0 401 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 PTPMT1Q8WUK0 201 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TM9SF4Q92544 642 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 HAS2Q92819 552 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TANKQ92844 425 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 MIB2Q96AX9 1013 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TRMOQ9BU70 441 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TRIM4Q9C037 500 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 IQCGQ9H095 443 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 RPF2Q9H7B2 306 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 PNO1Q9NRX1 252 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 SIRT5Q9NXA8 310 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 ACTL7BQ9Y614 415 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 CROCCQ5TZA2 2017 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 GLOD5A6NK44 160 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 J3QKU1 62 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 PRKNO60260 465 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-217ENST00000494395 ERLIN1O75477 346 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MYO1DO94832 1006 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 GPR75O95800 540 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 WDPCPO95876 746 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 IGKV3-11P04433 115 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CHRNGP07510 517 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 BPGMP07738 259 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 UROSP10746 265 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 STT3AP46977 705 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 TNFSF10P50591 281 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MLLT10P55197 1068 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 HMGCS1Q01581 520 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 UGT3A2Q3SY77 523 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 PRR30Q53SZ7 412 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CFAP157Q5JU67 520 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 ACER2Q5QJU3 275 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 NDUFAF5Q5TEU4 345 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 FCRLBQ6BAA4 426 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CLEC6AQ6EIG7 209 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 OR52E8Q6IFG1 317 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CYP20A1Q6UW02 462 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 SCIMPQ6UWF3 145 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 ZCCHC23Q6ZST2 131 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CROCCP2Q86T23 111 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 OR4N5Q8IXE1 308 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MMP21Q8N119 569 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 BEST3Q8N1M1 668 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MORN4Q8NDC4 146 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MDS2Q8NDY4 140 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CATSPER1Q8NEC5 780 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF721Q8TF20 911 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 NCLNQ969V3 563 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 TM4SF18Q96CE8 201 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 APIPQ96GX9 242 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CNDP1Q96KN2 507 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 SHCBP1LQ9BZQ2 653 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 TRIM45Q9H8W5 580 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-217ENST00000494395 KCNK13Q9HB14 408 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 PLA2G3Q9NZ20 509 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 AHSPQ9NZD4 102 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 LUZP4Q9P127 313 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 CES1P1Q9UKY3 287 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 PTGDR2Q9Y5Y4 395 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 SPACA6W5XKT8 324 aa8.16□□□□□ -1.1
ITGB1-217ENST00000494395 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 DYTNA2CJ06 578 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 OR5H15A6NDH6 313 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 PYCARD-AS1I3L0S3 204 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 TM9SF1O15321 606 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 RSL1D1O76021 490 aaKnown RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 CLPSP04118 112 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 FGF4P08620 206 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 ALOX15P16050 662 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 EPHA1P21709 976 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 PRPH2P23942 346 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 SERPINB3P29508 390 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 TLX1P31314 330 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 TIA1P31483 386 aaKnown RBP eCLIP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 GALNSP34059 522 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 SERPINB5P36952 375 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 CLCN2P51788 898 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 MAPK12P53778 367 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 MLF1P58340 268 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 TRA2BP62995 288 aaKnown RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 ASPHQ12797 758 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 STX4Q12846 297 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 BIKQ13323 160 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 TUBA3CQ13748 450 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF169Q14929 603 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 KIAA0040Q15053 153 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 INPP5JQ15735 1006 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 MEP1AQ16819 746 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 SPIN4Q56A73 249 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 ARL13AQ5H913 290 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-217ENST00000494395 CCNYL2Q5T2Q4 361 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 ABHD17BQ5VST6 288 aa8.15□□□□□ -1.1
ITGB1-217ENST00000494395 KANK2Q63ZY3 851 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms