RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PPP1R35Q8TAP8 253 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 MR1Q95460 341 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 MAL2Q969L2 176 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 ZUFSPQ96AP4 578 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 COQ10AQ96MF6 247 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 PITX2Q99697 317 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 PIP5K1AQ99755 562 aa7.55□□□□□ -1.2
BRCA1-221ENST00000493795 LIN28AQ9H9Z2 209 aaKnown RBP7.55□□□□□ -1.2
BRCA1-221ENST00000493795 A0A087WUU8 490 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 A6NCN8 305 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 WNT10BO00744 389 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TNFSF12O43508 249 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TBX10O75333 385 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SOX30O94993 753 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SERPINE2P07093 398 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 UGT2B7P16662 529 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ELK4P28324 431 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SCNN1AP37088 669 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 RPL13AP40429 203 aaKnown RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 NR4A2P43354 598 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 RAB8AP61006 207 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC10A1Q14973 349 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 DRICH1Q6PGQ1 229 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TMIGD1Q6UXZ0 262 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC43A2Q8N370 569 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 DTX3Q8N9I9 347 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 OR51T1Q8NGJ9 327 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 BMFQ96LC9 184 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SNX18Q96RF0 628 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CACNG6Q9BXT2 260 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CD300AQ9UGN4 299 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CA5BQ9Y2D0 317 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF536O15090 1300 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SPATA31A6Q5VVP1 1343 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 EDDM13A0A1B0GTR0 161 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TCRBV5S4A2TA0A5A2 114 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 EFCAB7A8K855 629 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 LOC730098B7Z3J9 87 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 MEIS2O14770 477 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 INPPL1O15357 1258 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 IRAK2O43187 625 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ITM2AO43736 263 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 KIAA0513O60268 411 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SNCGO76070 127 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CRYZL1O95825 349 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CSTAP01040 98 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CHRNA1P02708 482 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 MMP3P08254 477 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 PGCP20142 388 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 EVI2BP34910 448 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ATP4BP51164 291 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 EMX2Q04743 252 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ATP6AP1Q15904 470 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 EOGTQ5NDL2 527 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 DPY19L2P1Q6NXN4 242 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC2A12Q8TD20 617 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 C16orf78Q8WTQ4 265 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 HAS1Q92839 578 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ACDQ96AP0 544 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 PCED1BQ96HM7 432 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 GLTPQ9NZD2 209 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 POLR1AO95602 1720 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 RFPL2O75678 378 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 BCAS2O75934 225 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 KNG1P01042 644 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ACVR1BP36896 505 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 PBX2P40425 430 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ARRB1P49407 418 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 FXYD4P59646 89 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 NKX3-2P78367 333 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 PLCXD2Q0VAA5 305 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 NFATC4Q14934 902 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 COQ5Q5HYK3 327 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 FKBP1CQ5VVH2 108 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC22A25Q6T423 547 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CCBE1Q6UXH8 406 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM150AQ86TG1 271 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM151BQ8IW70 566 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SCML4Q8N228 414 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM185AQ8NFB2 350 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ZFAND2BQ8WV99 257 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TCEAL2Q9H3H9 227 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC2A4RGQ9NR83 387 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 HTR3BO95264 441 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 IL1AP01583 271 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TFP02787 698 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 C4BPAP04003 597 aaKnown RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM225BP0DP42 221 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 G6PDP11413 515 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF30P17039 623 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SLC2A5P22732 501 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CLCNKBP51801 687 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF763Q0D2J5 394 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 PPP1R8Q12972 351 aaKnown RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CCINQ13939 588 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CHRNA6Q15825 494 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms