RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-222ENST00000493792 VTI1BQ9UEU0 232 aa9.7□□□□□ -0.86
TRAPPC12-222ENST00000493792 CLDN16Q9Y5I7 305 aa9.7□□□□□ -0.86
TRAPPC12-222ENST00000493792 ADGRG4Q8IZF6 3080 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 TRAV17A0A0B4J275 112 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 C1orf226A1L170 272 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 TM9SF1O15321 606 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 RGS14O43566 566 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 NPHS1O60500 1241 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 SEC22BO75396 215 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZFAND5O76080 213 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 HSPA4LO95757 839 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 ANXA4P09525 319 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 LINC00032P0C843 101 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 NT5EP21589 574 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 SERPINB4P48594 390 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 POLEQ07864 2286 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 BIKQ13323 160 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZNF267Q14586 743 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 CASP8Q14790 479 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 NR6A1Q15406 480 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 H3F3CQ6NXT2 135 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 HSDL2Q6YN16 418 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 CSMD2Q7Z408 3487 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 MMP21Q8N119 569 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 TMEM156Q8N614 296 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZNF321PQ8N8H1 164 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 APCDD1LQ8NCL9 501 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 MORN4Q8NDC4 146 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 MGARPQ8TDB4 240 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 TM4SF18Q96CE8 201 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 KLHL29Q96CT2 875 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 ART5Q96L15 291 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 LIN28AQ9H9Z2 209 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 KLHL1Q9NR64 748 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 MCM8Q9UJA3 840 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 PSME2Q9UL46 239 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 DLGAP4Q9Y2H0 992 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 TRAF6Q9Y4K3 522 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 POLR3HQ9Y535 204 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 PTGDR2Q9Y5Y4 395 aa9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 COPG1Q9Y678 874 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-222ENST00000493792 APCP25054 2843 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 AKAP9Q99996 3911 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SETD2Q9BYW2 2564 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 A0A1W2PS29 197 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TMEM233B4DJY2 109 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 WWP2O00308 870 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SLC28A1O00337 649 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 PRAMEF2O60811 474 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZWINTO95229 277 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SERPINE1P05121 402 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 IL3P08700 152 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 PORP16435 677 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TIA1P31483 386 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 FEN1P39748 380 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 CD96P40200 585 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ETV4P43268 484 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TNFSF10P50591 281 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 XKP51811 444 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 MLF1P58340 268 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TRA2BP62995 288 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ERVK-8P63133 956 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 IGLV3-21P80748 117 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TUBA3CQ13748 450 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 OR1C1Q15619 314 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 CHI3L2Q15782 390 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZNF750Q32MQ0 723 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 GALNTL6Q49A17 601 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TUBA3EQ6PEY2 450 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ST13P4Q8IZP2 240 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SLC34A3Q8N130 599 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 OR5L2Q8NGL0 311 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 RIT1Q92963 219 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 EXOSC8Q96B26 276 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SNRNP40Q96DI7 357 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SENP5Q96HI0 755 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 C5orf34Q96MH7 638 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 NPAS2Q99743 824 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 RNF32Q9H0A6 362 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 LRTM1Q9HBL6 345 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 SSU72Q9NP77 194 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 AGPAT4Q9NRZ5 378 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ASF1BQ9NVP2 202 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 UTS2RQ9UKP6 389 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ERVK-19Q9WJR5 959 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 PCDHA9Q9Y5H5 950 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ACTL7BQ9Y614 415 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 ZNF780BQ9Y6R6 833 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 CPAMD8Q8IZJ3 1885 aa9.68□□□□□ -0.86
TRAPPC12-222ENST00000493792 TMEM120BA0PK00 339 aa9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 PRKNO60260 465 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 SKAP2O75563 359 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 ITGA10O75578 1167 aa9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 LYPLA1O75608 230 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 RSL1D1O76021 490 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-222ENST00000493792 SLC35E2P0CK97 266 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms