RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ABATP80404 500 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 CDH17Q12864 832 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 TPSAB1Q15661 275 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 CARTPTQ16568 116 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 ZNF791Q3KP31 576 aaPredicted RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 PIGGQ5H8A4 983 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 THEMIS2Q5TEJ8 643 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 PTRHD1Q6GMV3 140 aaKnown RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 SBSNQ6UWP8 590 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 ENPP6Q6UWR7 440 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 PACS1Q6VY07 963 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 STAC2Q6ZMT1 411 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 ZNF321PQ8N8H1 164 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 TC2NQ8N9U0 490 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 LINC01356Q8N9X3 169 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 PPFIBP2Q8ND30 876 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 OR10G3Q8NGC4 313 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 ACTL9Q8TC94 416 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 LKAAEAR1Q8TD35 194 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 ALKBH8Q96BT7 664 aaKnown RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 TM4SF19Q96DZ7 209 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 SPACA9Q96E40 222 aaPredicted RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 CCT8L2Q96SF2 557 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 TRIM2Q9C040 744 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 OR8D2Q9GZM6 311 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 UBQLN3Q9H347 655 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 NLE1Q9NVX2 485 aaPredicted RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 TSR3Q9UJK0 312 aaKnown RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 CHCHD2Q9Y6H1 151 aaPredicted RBP4.83□□□□□ -1.64
SEC13-219ENST00000492602 CLCA3PQ9Y6N3 262 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 NINQ8N4C6 2090 aa4.83□□□□□ -1.64
SEC13-219ENST00000492602 PRR14LQ5THK1 2151 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 HEATR5BQ9P2D3 2071 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 MAGEB16A2A368 324 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 POM121CA8CG34 1229 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 H3BMM5 538 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 H7C0S8 307 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 SMAPO00193 183 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 NDUFS8O00217 210 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PLOD2O00469 737 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 EMC8O43402 210 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 RAMP1O60894 148 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 NDUFS3O75489 264 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 IFNB1P01574 187 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ESR1P03372 595 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 IFNA16P05015 189 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 F7P08709 466 aaPredicted RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 RNH1P13489 461 aaKnown RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 ALOX12P18054 663 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PAMP19021 973 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PCMT1P22061 227 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ADRA1DP25100 572 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PTPN7P35236 360 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ADRA1AP35348 466 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 HSD17B2P37059 387 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 COILP38432 576 aaPredicted RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 KCNC1P48547 511 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 NPY2RP49146 381 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 TTPAP49638 278 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 STARP49675 285 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 EFNA4P52798 201 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 SEMA3AQ14563 771 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 POU6F1Q14863 301 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 RPS6KA1Q15418 735 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 MPEG1Q2M385 716 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 KBTBD12Q3ZCT8 623 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ANKRD20A4Q4UJ75 823 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 CAPN13Q6MZZ7 669 aaPredicted RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 MRNIPQ6NTE8 343 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 SHQ1Q6PI26 577 aaKnown RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 CHMP1BQ7LBR1 199 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ATG4DQ86TL0 474 aaPredicted RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 LRRC6Q86X45 466 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 TRIM42Q8IWZ5 723 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PALM2Q8IXS6 379 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 KRT222Q8N1A0 295 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 TMEM132CQ8N3T6 1108 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 AFAP1L2Q8N4X5 818 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 OTUD6BQ8N6M0 293 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 GPATCH11Q8N954 259 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ZDHHC22Q8N966 263 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ZNF740Q8NDX6 193 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 FAM83FQ8NEG4 500 aaPredicted RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 OR9A1PQ8NGU1 263 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 OR4L1Q8NH43 312 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 OR8K3Q8NH51 312 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 MRAPQ8TCY5 172 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 ANP32BQ92688 251 aaKnown RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 DIO2Q92813 273 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 DAZLQ92904 295 aaKnown RBP4.82□□□□□ -1.64
SEC13-219ENST00000492602 UBE2FQ969M7 185 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 THAP11Q96EK4 314 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 CDKN2AIPNLQ96HQ2 116 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 RUNDC3BQ96NL0 473 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 FOXN4Q96NZ1 517 aa4.82□□□□□ -1.64
SEC13-219ENST00000492602 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms