RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 ZNF770Q6IQ21 691 aaPredicted RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 SLC48A1Q6P1K1 146 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 VN1R4Q7Z5H5 301 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 B3GNT8Q7Z7M8 397 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 NRROSQ86YC3 692 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 CCDC71Q8IV32 467 aaPredicted RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 ATG16L2Q8NAA4 619 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 OR10G2Q8NGC3 310 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 OR56A1Q8NGH5 318 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 OR5AK3PQ8NH89 298 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 RHOXF1Q8NHV9 184 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 BBS10Q8TAM1 723 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SUN3Q8TAQ9 357 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SPPL2AQ8TCT8 520 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 RAB2BQ8WUD1 216 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 FKBP10Q96AY3 582 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 EXOSC8Q96B26 276 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 C12orf43Q96C57 262 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 TMEM19Q96HH6 336 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 ZNF354BQ96LW1 612 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 COG8Q96MW5 612 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 NODALQ96S42 347 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 ZNF607Q96SK3 696 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 FEVQ99581 238 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 MAPKAP1Q9BPZ7 522 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 C17orf62Q9BQA9 187 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 FUZQ9BT04 418 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SPATA5L1Q9BVQ7 753 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 FOXQ1Q9C009 403 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 ADNPQ9H2P0 1102 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SERHL2Q9H4I8 314 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 LTB4R2Q9NPC1 389 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 FKBP14Q9NWM8 211 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SCN3BQ9NY72 215 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 P2RX2Q9UBL9 471 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 NDOR1Q9UHB4 597 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 PCDHGA6Q9Y5G7 932 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 GPC6Q9Y625 555 aaPredicted RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 DCHS1Q96JQ0 3298 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 DSPPQ9NZW4 1301 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 A0A0G2JPF8 293 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 HNRNPCL2B2RXH8 293 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 HNRNPCL3B7ZW38 293 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 C4orf51C9J302 202 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 C5orf58C9J3I9 102 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 PRAMEF26H0Y7S4 382 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 BTN3A3O00478 584 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ERI3O43414 337 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 WBP4O75554 376 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 SERPINB7O75635 380 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SLITRK5O94991 958 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 DIRAS1O95057 198 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 EML2O95834 649 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 HNRNPCL4P0DMR1 293 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 GABRB1P18505 474 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 CSNK2A2P19784 350 aaPredicted RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 AGXTP21549 392 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SDHBP21912 280 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 AQP1P29972 269 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 CD6P30203 668 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SLC19A1P41440 591 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 YAP1P46937 504 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 KHKP50053 298 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 RGS1Q08116 209 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SLAMF1Q13291 335 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SIM2Q14190 667 aaPredicted RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 UBXN2BQ14CS0 331 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ALG11Q2TAA5 492 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ZNF528Q3MIS6 628 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 TOR1AIP1Q5JTV8 583 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SYT6Q5T7P8 510 aaPredicted RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 FBXO42Q6P3S6 717 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ANGPTL8Q6UXH0 198 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 PRSS48Q7RTY5 328 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ADCK2Q7Z695 626 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ANKRD13BQ86YJ7 626 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 RBM12BQ8IXT5 1001 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 DEPDC4Q8N2C3 294 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 LINC00471Q8N535 108 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SLC5A8Q8N695 610 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 NR4A3Q92570 626 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 ERLEC1Q96DZ1 483 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 DTNBP1Q96EV8 351 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 C10orf90Q96M02 699 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 OR2A14Q96R47 310 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 OR2A5Q96R48 311 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SERINC2Q96SA4 455 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SH3GL3Q99963 347 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 RSPO3Q9BXY4 272 aaPredicted RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 SRMSQ9H3Y6 488 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 RIBC2Q9H4K1 309 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 FANCEQ9HB96 536 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 PRM3Q9NNZ6 103 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 POT1Q9NUX5 634 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 PAK1IP1Q9NWT1 392 aaPredicted RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 KIF17Q9P2E2 1029 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 APOBEC3BQ9UH17 382 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 RAB23Q9ULC3 237 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms