RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HIST1H2ADP20671 130 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 CRHBPP24387 322 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HRH2P25021 359 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 SOX11P35716 441 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 POLR2IP36954 125 aaKnown RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 VSX2P58304 361 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 RPS18P62269 152 aaKnown RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ERVK-8P63133 956 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 SNRPNP63162 240 aaKnown RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 KCNC4Q03721 635 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 TIGD2Q4W5G0 525 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ATP1A1-AS1Q5TC04 95 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 C1orf189Q5VU69 101 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 FAM69BQ5VUD6 431 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 PRAMEF13Q5VWM6 474 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 XAF1Q6GPH4 301 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 TBPL2Q6SJ96 375 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 PCSK4Q6UW60 755 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ZDHHC13Q8IUH4 622 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 PLD3Q8IV08 490 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 TMEM151BQ8IW70 566 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 GPR135Q8IZ08 494 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HDAC2Q92769 488 aaKnown RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 MR1Q95460 341 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HIST1H2AHQ96KK5 128 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 TEX37Q96LM6 180 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 LRFN5Q96NI6 719 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 PRAP1Q96NZ9 151 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF347Q96SE7 839 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HIST1H2AJQ99878 128 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 H2AFJQ9BTM1 129 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 LHPPQ9H008 270 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 CHST8Q9H2A9 424 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 OARD1Q9Y530 152 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 TIMM22Q9Y584 194 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 STX16O14662 325 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 HAT1O14929 419 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 DNAJB5O75953 348 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 RSL1D1O76021 490 aaKnown RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 PRSS23O95084 383 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 RPS17P08708 135 aaKnown RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 FURINP09958 794 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 ATXN8OSP0DMR3 200 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 TPD52P55327 224 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 AP1S2P56377 157 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 UFM1P61960 85 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 OCA2Q04671 838 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 CHRNB3Q05901 458 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 ITGADQ13349 1161 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 TRIM16LQ309B1 348 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 ZIK1Q3SY52 487 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 XKR7Q5GH72 579 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 ZC3H12BQ5HYM0 836 aaKnown RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 STK32CQ86UX6 486 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 RIMKLAQ8IXN7 391 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 TMBIM1Q969X1 311 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 NEURL2Q9BR09 285 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 WARS2Q9UGM6 360 aaKnown RBP8.89□□□□□ -0.99
BRCA1-219ENST00000491747 CORINQ9Y5Q5 1042 aa8.89□□□□□ -0.99
BRCA1-219ENST00000491747 NCF1BA6NI72 391 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 NCF1CA8MVU1 366 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 CLDN25C9JDP6 229 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 H0YGG7 62 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 TAPBPO15533 448 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 KATNA1O75449 491 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 NCF1P14598 390 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 JAK1P23458 1154 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZFP36L2P47974 494 aaKnown RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 PLA2G16P53816 162 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FOXL2P58012 376 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 GABARAPL2P60520 117 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ARF3P61204 181 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ABATP80404 500 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 DNASE1L3Q13609 305 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FBXO48Q5FWF7 155 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 GTF2IRD2BQ6EKJ0 949 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 RHBDD2Q6NTF9 364 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 LCTLQ6UWM7 567 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FKBP9P1Q75LS8 142 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 R3HCC1LQ7Z5L2 792 aaKnown RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 GTF2IRD2Q86UP8 949 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 DPP10Q8N608 796 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FNDC5Q8NAU1 212 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF555Q8NEP9 628 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 KIAA1143Q96AT1 154 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 OR2A5Q96R48 311 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZFYVE21Q9BQ24 234 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 C1QTNF3Q9BXJ4 246 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 UGT2B28Q9BY64 529 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 NTN4Q9HB63 628 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 HMG20AQ9NP66 347 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ATAD3AQ9NVI7 634 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SLAMF8Q9P0V8 285 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ANKMY1Q9P2S6 941 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 CHD6Q8TD26 2715 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 IGSF10Q6WRI0 2623 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 A0A1B0GTL3 188 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FITM1A5D6W6 292 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms