RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MTMR14Q8NCE2 650 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 MGME1Q9BQP7 344 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 PDGFDQ9GZP0 370 aaPredicted RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 UPB1Q9UBR1 384 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CACNG3O60359 315 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 PRAF2O60831 178 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 SPDEFO95238 335 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CBSLP0DN79 551 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 NAT2P11245 290 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TACR1P25103 407 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 HTR2AP28223 471 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CBSP35520 551 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 VGLL4Q14135 290 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 GLCCI1Q86VQ1 547 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 LHFPL5Q8TAF8 219 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CREB3L4Q8TEY5 395 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TRIB3Q96RU7 358 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 FAIM2Q9BWQ8 316 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 REEP4Q9H6H4 257 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 MCCC2Q9HCC0 563 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ACSL6Q9UKU0 697 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 SMCHD1A6NHR9 2005 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ITGB4P16144 1822 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 RIIAD1A6NNX1 92 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 J3QLW9 94 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 OR7A17O14581 309 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TBL1XO60907 577 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TGFB1P01137 390 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 IFNGP01579 166 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ZNF19P17023 458 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TGM4P49221 684 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CRISP3P54108 245 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 WDR5P61964 334 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 RPS24P62847 133 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 RPS25P62851 125 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CRYZQ08257 329 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 CHRNA6Q15825 494 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ATXN7L2Q5T6C5 722 aaPredicted RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 FAM220AQ7Z4H9 259 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 C10orf53Q8N6V4 93 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 ZNF454Q8N9F8 522 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TRMT10AQ8TBZ6 339 aaKnown RBP10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 FCRL1Q96LA6 429 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 NDUFAF4Q9P032 175 aa10.78□□□□□ -0.68
CRNKL1-204ENST00000490910 TEX46H3BTG2 121 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 TOR1AO14656 332 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 ACPPP15309 386 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 FOSL1P15407 271 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 ZNF250P15622 560 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 AP1S1P61966 158 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 POLR2LP62875 67 aaKnown RBP10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 TAP2Q03519 686 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 ZNF763Q0D2J5 394 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 DUSP4Q13115 394 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 CLLU1Q5K131 121 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 INO80EQ8NBZ0 244 aaPredicted RBP10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 OR52N2Q8NGI0 321 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 TMEM163Q8TC26 289 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 RAET1EQ8TD07 263 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 CCDC107Q8WV48 283 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 RAB8BQ92930 207 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 RAD51AP1Q96B01 352 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 KLRG1Q96E93 195 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 SLC35G5Q96KT7 338 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 MCCC1Q96RQ3 725 aaPredicted RBP10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 NTMT1Q9BV86 223 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 SAP130Q9H0E3 1048 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 CAPN10Q9HC96 672 aa10.77□□□□□ -0.68
CRNKL1-204ENST00000490910 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 NCR1O76036 304 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 MT-ND5P03915 603 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TCRBP04435 133 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TPOP07202 933 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PRR35P0CG20 571 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 SAGP10523 405 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 CENPAP49450 140 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TRAPPC5Q8IUR0 188 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PKMYT1Q99640 499 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 P2RX2Q9UBL9 471 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PADI2Q9Y2J8 665 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 GPR52Q9Y2T5 361 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 SNX11Q9Y5W9 270 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 MMP3P08254 477 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 HK3P52790 923 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 SNRPD1P62314 119 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TCTE1Q5JU00 501 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 FAHD1Q6P587 224 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 BAIAP2L2Q6UXY1 529 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 KANSL1Q7Z3B3 1105 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 OR56B4Q8NH76 319 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 RADILQ96JH8 1075 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms