RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DDI2Q5TDH0 399 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 AGAP7PQ5VUJ5 663 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ZNF774Q6NX45 483 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 EMBQ6PCB8 327 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 RGS9BPQ6ZS82 235 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 RABEPKQ7Z6M1 372 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 TMEM110Q86TL2 294 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 LAX1Q8IWV1 398 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 OR4Q3Q8NH05 313 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SHC3Q92529 594 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ESAMQ96AP7 390 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 SSX3Q99909 188 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ACPTQ9BZG2 426 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 NT5C3AQ9H0P0 336 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 LIME1Q9H400 295 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 FAM212BQ9NTI7 297 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 AATFQ9NY61 560 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 PSORS1C1Q9UIG5 152 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 FBXW2Q9UKT8 454 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 EXOC6BQ9Y2D4 811 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 CPQQ9Y646 472 aa3.9□□□□□ -1.79
HMGB1P38-201ENST00000490557 ATP6AP2A0A1C7CYW4 349 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 SMIM30A4D0T7 59 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 K7EQG2 157 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 RIPK2O43353 540 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 RTN2O75298 545 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 CSO75390 466 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 ANXA9O76027 345 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 SFTPCP11686 197 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 VCLP18206 1134 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 PBLDP30039 288 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 NME5P56597 212 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 NPRL3Q12980 569 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 GIT2Q14161 759 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 C9orf66Q5T8R8 295 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 C1orf189Q5VU69 101 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 PRAMEF8Q5VWM4 474 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 SPINK14Q6IE38 97 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 ETFRF1Q6IPR1 90 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 TMEM270Q6UE05 265 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 CD164L2Q6UWJ8 174 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 NUFIP2Q7Z417 695 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 C17orf64Q86WR6 236 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 LRRC49Q8IUZ0 686 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 RTL3Q8N8U3 475 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 CCDC110Q8TBZ0 833 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 BRSK1Q8TDC3 778 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 HAS2Q92819 552 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 MRPL24Q96A35 216 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 PCED1BQ96HM7 432 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 DDX50Q9BQ39 737 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 ZDHHC6Q9H6R6 413 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 VPS37BQ9H9H4 285 aa3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 PIN4Q9Y237 131 aaKnown RBP3.89□□□□□ -1.79
HMGB1P38-201ENST00000490557 TRBV5-4A0A0C4DH59 114 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CLRN2A0PK11 232 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 SLC15A5A6NIM6 579 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 UBXN8O00124 270 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 PEX11AO75192 247 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 DUSP11O75319 330 aaKnown RBP3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 IFNB1P01574 187 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 EPOP01588 193 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 OPN1MWP04001 364 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CHRNGP07510 517 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 OPN1MW2P0DN77 364 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 OPN1MW3P0DN78 364 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CALML3P27482 149 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 ANP32AP39687 249 aaKnown RBP3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CASP3P42574 277 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 SULT1E1P49888 294 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 GMFBP60983 142 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 IFT88Q13099 833 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 PEX6Q13608 980 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 HEPACAMQ14CZ8 416 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 TRADDQ15628 312 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 INAQ16352 499 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CEP55Q53EZ4 464 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 TEX35Q5T0J7 233 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 SEL1L3Q68CR1 1132 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CCBE1Q6UXH8 406 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 LPCAT2Q7L5N7 544 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 ZNF781Q8N8C0 355 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 SAMD12Q8N8I0 201 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 LPCAT1Q8NF37 534 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 BEST4Q8NFU0 473 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 GOLGA5Q8TBA6 731 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 FAM46BQ96A09 425 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 C16orf58Q96GQ5 468 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 RUFY1Q96T51 708 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 S1PR3Q99500 378 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 CRACR2AQ9BSW2 395 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 TCHPQ9BT92 498 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 OSBPL8Q9BZF1 889 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 WWP1Q9H0M0 922 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 DPH5Q9H2P9 285 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 MAGEF1Q9HAY2 307 aa3.88□□□□□ -1.79
HMGB1P38-201ENST00000490557 POLE3Q9NRF9 147 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms