RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 FAM95CA0A1B0GW59 222 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ANKRD33BA6NCL7 494 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 DNALI1O14645 258 aaPredicted RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 SMAD7O15105 426 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 SCELO95171 688 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 HPNP05981 417 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ALOX15P16050 662 aaPredicted RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 BMP7P18075 431 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 HSPA7P48741 367 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 PLIN5Q00G26 463 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ZNF267Q14586 743 aaPredicted RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 PPP1R7Q15435 360 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 AP5B1Q2VPB7 878 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 EIPR1Q53HC9 387 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 TBCELQ5QJ74 424 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 DCST1Q5T197 706 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 TMEM64Q6YI46 380 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 RNF111Q6ZNA4 994 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ZC3HC1Q86WB0 502 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 GRK7Q8WTQ7 553 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ZNF473Q8WTR7 871 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 ISL2Q96A47 359 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 WDR34Q96EX3 536 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 Q96MF0 132 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 GNRHR2Q96P88 292 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 KRT12Q99456 494 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 EFCAB11Q9BUY7 163 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 SORBS1Q9BX66 1292 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 UBQLN3Q9H347 655 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
VARS-227ENST00000489979 CALHM2Q9HA72 323 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 CHMP2BQ9UQN3 213 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 COL6A5A8TX70 2615 aa12.77□□□□□ -0.37
VARS-227ENST00000489979 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SAP18O00422 153 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 TP53I11O14683 189 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SMPD2O60906 423 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 TGFB1P01137 390 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 TMIGD3P0DMS9 266 aaPredicted RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 CDC25BP30305 580 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 GGT5P36269 586 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 ELK3P41970 407 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SSR2P43308 183 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 MASP1P48740 699 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 FBXW4P57775 412 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 FOXF2Q12947 444 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SLAMF1Q13291 335 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 BIKQ13323 160 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 LAPTM5Q13571 262 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 TOMM20Q15388 145 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 PDK4Q16654 411 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 HIST2H2ACQ16777 129 aaPredicted RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 PAGE2BQ5JRK9 111 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 FNDC7Q5VTL7 733 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 HIST2H2AA3Q6FI13 130 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 CXXC5Q7LFL8 322 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 LUZP2Q86TE4 346 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SPATA3Q8NHX4 192 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 SMPDL3BQ92485 455 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 TANKQ92844 425 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 RILPQ96NA2 401 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 CNOT10Q9H9A5 744 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
VARS-227ENST00000489979 GALNT8Q9NY28 637 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 ASIC3Q9UHC3 531 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 C15orf41Q9Y2V0 281 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 ZANQ9Y493 2812 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 MED12LQ86YW9 2145 aa12.76□□□□□ -0.37
VARS-227ENST00000489979 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 CES2O00748 559 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 CASKO14936 926 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 OR10H2O60403 315 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 STK16O75716 305 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 SNX4O95219 450 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 CLPSP04118 112 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 PCNAP12004 261 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 EPORP19235 508 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 SOX18P35713 384 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 SLCO1A2P46721 670 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 CPA2P48052 419 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 FNTAP49354 379 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 SLC37A1P57057 533 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 TNFRSF17Q02223 184 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 IRF8Q02556 426 aa12.75□□□□□ -0.37
VARS-227ENST00000489979 CHIT1Q13231 466 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms