RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR10H2O60403 315 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 MTHFD2P13995 350 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 DNAJA1P31689 397 aaKnown RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 STX2P32856 288 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 ARFIP1P53367 373 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 DLX5P56178 289 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 EBPQ15125 230 aaKnown RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 RIPPLY2Q5TAB7 128 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 WDR53Q7Z5U6 358 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 DOK4Q8TEW6 326 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 NRGNQ92686 78 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 DOCK7Q96N67 2140 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 ZNF717Q9BY31 904 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 SLC6A15Q9H2J7 730 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 PROK2Q9HC23 129 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 RYDENQ9NUL5 291 aaKnown RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 LYARQ9NX58 379 aaKnown RBP16.95■□□□□ 0.3
HDAC6-231ENST00000488905 QPCTLQ9NXS2 382 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 ALKBH4Q9NXW9 302 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 CNIH4Q9P003 139 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 B4GALT7Q9UBV7 327 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 TSC22D4Q9Y3Q8 395 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 ANGPTL3Q9Y5C1 460 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 PCDHGB3Q9Y5G1 929 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 KIAA1549Q9HCM3 1950 aa16.95■□□□□ 0.3
HDAC6-231ENST00000488905 IQANK1A0A1B0GTG1 560 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 OR6C76A6NM76 312 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 PROM1O43490 865 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 LRATO95237 230 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 NR2F6P10588 404 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 SERPINB3P29508 390 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 SLC37A1P57057 533 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 RPS13P62277 151 aaKnown RBP16.94■□□□□ 0.3
HDAC6-231ENST00000488905 PHEXP78562 749 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 NAB1Q13506 487 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-231ENST00000488905 SETDB1Q15047 1291 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 NTRK2Q16620 822 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 LIPJQ5W064 366 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 MRM1Q6IN84 353 aaKnown RBP16.94■□□□□ 0.3
HDAC6-231ENST00000488905 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 ULK2Q8IYT8 1036 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 CENPLQ8N0S6 344 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-231ENST00000488905 LIX1Q8N485 282 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 RHEBL1Q8TAI7 183 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 NEIL3Q8TAT5 605 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 KCTD4Q8WVF5 259 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 NXNL1Q96CM4 212 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 DOHHQ9BU89 302 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 ACTR8Q9H981 624 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 ACKR4Q9NPB9 350 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 CNOT11Q9UKZ1 510 aaKnown RBP16.94■□□□□ 0.3
HDAC6-231ENST00000488905 PCDHGA11Q9Y5H2 935 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 ACANP16112 2415 aa16.94■□□□□ 0.3
HDAC6-231ENST00000488905 A0A0A6YYD5 115 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 H0YIV9 168 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 TMPRSS11DO60235 418 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 EEDO75530 441 aaKnown RBP16.93■□□□□ 0.3
HDAC6-231ENST00000488905 GPR75O95800 540 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 CLPSP04118 112 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 IRF9Q00978 393 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 ARSKQ6UWY0 536 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 FBF1Q8TES7 1133 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 RIT1Q92963 219 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 REPS1Q96D71 796 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 ZNF597Q96LX8 424 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 JSRP1Q96MG2 331 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-231ENST00000488905 ACOT9Q9Y305 439 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 ASB4Q9Y574 426 aa16.93■□□□□ 0.3
HDAC6-231ENST00000488905 NIPBLQ6KC79 2804 aaeCLIP16.93■□□□□ 0.3
HDAC6-231ENST00000488905 MED12Q93074 2177 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 GLOD5A6NK44 160 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 UGDHO60701 494 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 AIFM1O95831 613 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 GFAPP14136 432 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 PTX3P26022 381 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-231ENST00000488905 GDF1P27539 372 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 BSGP35613 385 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 TRPC1P48995 793 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 PLTPP55058 493 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 RPS6KA2Q15349 733 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 FAM83EQ2M2I3 478 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 CYP20A1Q6UW02 462 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 SEM1Q6ZVN7 128 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 CCDC91Q7Z6B0 441 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 NUDT13Q86X67 352 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 ZZZ3Q8IYH5 903 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 TAGAPQ8N103 731 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 ZNF441Q8N8Z8 693 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 FBXO25Q8TCJ0 367 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 DDX31Q9H8H2 851 aaKnown RBP16.92■□□□□ 0.3
HDAC6-231ENST00000488905 WDR41Q9HAD4 459 aa16.92■□□□□ 0.3
HDAC6-231ENST00000488905 DNAJB12Q9NXW2 375 aaKnown RBP16.92■□□□□ 0.3
HDAC6-231ENST00000488905 UTP11Q9Y3A2 253 aaKnown RBP16.92■□□□□ 0.3
HDAC6-231ENST00000488905 FLNAP21333 2647 aaKnown RBP16.92■□□□□ 0.3
HDAC6-231ENST00000488905 A0A087X1B8 175 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms