RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	TIMP3	P35625	211 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	GMPR	P36959	345 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CASP2	P42575	452 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	MSH2	P43246	934 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	LTB	Q06643	244 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TBL3	Q12788	808 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CHIT1	Q13231	466 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	OR4D1	Q15615	310 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TBCC	Q15814	346 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	NTRK2	Q16620	822 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CDKL4	Q5MAI5	379 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SULT1C3	Q6IMI6	304 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571		Q71RC1	249 aa	Predicted RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	MAATS1	Q7Z4T9	603 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	BIVM	Q86UB2	503 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	GPSM1	Q86YR5	675 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	LACC1	Q8IV20	430 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	LAS2	Q8IYD9	372 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	DND1	Q8IYX4	353 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TCAIM	Q8N3R3	496 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SNX31	Q8N9S9	440 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SRFBP1	Q8NEF9	429 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	VPS39	Q96JC1	886 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	DGAT2	Q96PD7	388 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	TIMP4	Q99727	224 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	PRDM14	Q9GZV8	571 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	RHOJ	Q9H4E5	214 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	RPF2	Q9H7B2	306 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	PLEKHF2	Q9H8W4	249 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CNOT10	Q9H9A5	744 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	CAB39L	Q9H9S4	337 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SMYD2	Q9NRG4	433 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	PTBP2	Q9UKA9	531 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	EDAR	Q9UNE0	448 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	MTO1	Q9Y2Z2	717 aa	Known RBP	10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	SPACA6	W5XKT8	324 aa		10.41	□□□□□ -0.74
SNU13-208	ENST00000488571	EXPH5	Q8NEV8	1989 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571		A0A1W2PPR1	153 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	ANKRD33B	A6NCL7	494 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	TUBAL3	A6NHL2	446 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	WASHC1	A8K0Z3	465 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PHGDH	O43175	533 aa	Known RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PRKRA	O75569	313 aa	Known RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	CCDC166	P0CW27	439 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	EPX	P11678	715 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	CD1D	P15813	335 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SERPINB3	P29508	390 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SSR2	P43308	183 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SLC37A1	P57057	533 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	HERVK_113	P63132	956 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	ERVK-8	P63133	956 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PLIN5	Q00G26	463 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	IRF8	Q02556	426 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SLAMF1	Q13291	335 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	LAPTM5	Q13571	262 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	EBP	Q15125	230 aa	Known RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SPRED3	Q2MJR0	410 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	AP5B1	Q2VPB7	878 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	TMEM35A	Q53FP2	167 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PAGE2B	Q5JRK9	111 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	FNDC7	Q5VTL7	733 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	BICRAL	Q6AI39	1079 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	VASN	Q6EMK4	673 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	TMEM64	Q6YI46	380 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	SLC35F6	Q8N357	371 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	LIX1	Q8N485	282 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	RNF175	Q8N4F7	328 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	ZNF441	Q8N8Z8	693 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PDPR	Q8NCN5	879 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	FBXO36	Q8NEA4	188 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	RBM18	Q96H35	190 aa	Known RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	JSRP1	Q96MG2	331 aa	Predicted RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	GAL3ST4	Q96RP7	486 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	DOHH	Q9BU89	302 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	ERVK-6	Q9BXR3	956 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	PHACTR1	Q9C0D0	580 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	WWTR1	Q9GZV5	400 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	UBQLN3	Q9H347	655 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	JKAMP	Q9P055	326 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	MTRF1L	Q9UGC7	380 aa	Known RBP	10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	ERVK-19	Q9WJR5	959 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571	DOCK7	Q96N67	2140 aa		10.4	□□□□□ -0.74
SNU13-208	ENST00000488571		E7ESA3	106 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	CES2	O00748	559 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	CCNT2	O60583	730 aa	Known RBP	10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	IL2RA	P01589	272 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	HPN	P05981	417 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	ALOX15	P16050	662 aa	Predicted RBP	10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	GDF1	P27539	372 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	AGFG1	P52594	562 aa	Known RBP	10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	HNRNPH2	P55795	449 aa	Known RBP	10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	ARL4C	P56559	192 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	POU4F1	Q01851	419 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	TNFRSF17	Q02223	184 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	PDIA2	Q13087	525 aa	Known RBP	10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	BIK	Q13323	160 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	KEAP1	Q14145	624 aa		10.39	□□□□□ -0.75
SNU13-208	ENST00000488571	ZNF267	Q14586	743 aa	Predicted RBP	10.39	□□□□□ -0.75

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