RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PTBP1P26599 531 aaKnown RBP eCLIP13.52□□□□□ -0.25
RER1-207ENST00000488353 POU1F1P28069 291 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 CD70P32970 193 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 CTSOP43234 321 aaPredicted RBP13.52□□□□□ -0.25
RER1-207ENST00000488353 SNTA1Q13424 505 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 NFE2L1Q14494 772 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 GPR33Q49SQ1 333 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 CNIH2Q6PI25 160 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 BRAT1Q6PJG6 821 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 PRSS42Q7Z5A4 293 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 PDZD3Q86UT5 571 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 COMMD7Q86VX2 200 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 GPALPP1Q8IXQ4 340 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 AQP11Q8NBQ7 271 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 TMEM43Q9BTV4 400 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 MGAT4AQ9UM21 535 aa13.52□□□□□ -0.25
RER1-207ENST00000488353 LTBP2Q14767 1821 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 KCNE1BA0A087WTH5 132 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 TLR4O00206 839 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TSPAN4O14817 238 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LRG1P02750 347 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 OPN1SWP03999 348 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TPOP07202 933 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 C8AP07357 584 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 DDCP20711 480 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LHCGRP22888 699 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LMAN2Q12907 356 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 BAMBIQ13145 260 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 AANATQ16613 207 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 COL28A1Q2UY09 1125 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 GGTA1PQ4G0N0 100 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 C16orf62Q7Z3J2 963 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TIGD4Q8IY51 512 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 TM9SF2Q99805 663 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 ZBP1Q9H171 429 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 NT5DC2Q9H857 520 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 HCFC1R1Q9NWW0 138 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 UCKL1Q9NWZ5 548 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 COMMD3Q9UBI1 195 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 ZNF106Q9H2Y7 1883 aaKnown RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 ZNF821O75541 412 aaPredicted RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 GADD45GO95257 159 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LATS1O95835 1130 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TIMP1P01033 207 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 CPEP16870 476 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 AOAHP28039 575 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 BTG1P62324 171 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 CHIT1Q13231 466 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 IL18Q14116 193 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 USP30Q70CQ3 517 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 GPR65Q8IYL9 337 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 NAGSQ8N159 534 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TMEM163Q8TC26 289 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 TMEM203Q969S6 136 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 MTERF1Q99551 399 aaKnown RBP13.51□□□□□ -0.25
RER1-207ENST00000488353 PIP5K1AQ99755 562 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 PPA2Q9H2U2 334 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
RER1-207ENST00000488353 SGK494L7N484 410 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 YY2O15391 372 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CCL16O15467 120 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 IGSF6O95976 241 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 GASTP01350 101 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 PRKACAP17612 351 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 LIMS1P48059 325 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 PTSQ03393 145 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 ELOAQ14241 798 aaKnown RBP13.5□□□□□ -0.25
RER1-207ENST00000488353 P2RY14Q15391 338 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 KLHL22Q53GT1 634 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CLLU1Q5K131 121 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 SERPINA13PQ6UXR4 307 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 ABI3BPQ7Z7G0 1075 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 ZNF366Q8N895 744 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 DTX3Q8N9I9 347 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 IL17RCQ8NAC3 791 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 VPS37AQ8NEZ2 397 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 TOE1Q96GM8 510 aaKnown RBP13.5□□□□□ -0.25
RER1-207ENST00000488353 TCF25Q9BQ70 676 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 RERGLQ9H628 205 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 B3GAT2Q9NPZ5 323 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 PTTG3PQ9NZH4 202 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 C1orf226A1L170 272 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 ARRDC5A6NEK1 342 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms