RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 QPRTQ15274 297 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 BRAT1Q6PJG6 821 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 UNC5DQ6UXZ4 953 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 DEFB128Q7Z7B8 93 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 HMGN2P46Q86SG4 172 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GLCCI1Q86VQ1 547 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TMEM25Q86YD3 366 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SLC30A8Q8IWU4 369 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 KLHDC8AQ8IYD2 350 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 RDH10Q8IZV5 341 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CADM2Q8N3J6 435 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ATP6V1C2Q8NEY4 427 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 OR52I1Q8NGK6 324 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SLC5A11Q8WWX8 675 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 KCTD7Q96MP8 289 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 MTG2Q9H4K7 406 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SLA2Q9H6Q3 261 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SLAMF7Q9NQ25 335 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SPG21Q9NZD8 308 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 COMMD3Q9UBI1 195 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SEC14L3Q9UDX4 400 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 FAM25AB3EWG3 89 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 FAM25CB3EWG5 89 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 FAM25GB3EWG6 89 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ANHXE9PGG2 379 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ALX3O95076 343 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TRAPPC2P0DI81 140 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TRAPPC2BP0DI82 140 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 PSKH1P11801 424 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 MYL12AP19105 171 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SLC9A3P48764 834 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 RPS25P62851 125 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GALK2Q01415 458 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CCDC58Q4VC31 144 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 FLYWCH1Q4VC44 716 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 LAPTM4BQ86VI4 370 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TRAPPC5Q8IUR0 188 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CLDN22Q8N7P3 220 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GDPD1Q8N9F7 314 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 OR7G1Q8NGA0 311 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GATAD2BQ8WXI9 593 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SORCS1Q8WY21 1168 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 MTERF3Q96E29 417 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 LMLNQ96KR4 655 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TEFMQ96QE5 360 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TMEM245Q9H330 911 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CTPS2Q9NRF8 586 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 NDOR1Q9UHB4 597 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 NDRG2Q9UN36 371 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 M0R3H8 397 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 POLR1CO15160 346 aaPredicted RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 PLA2G10O15496 165 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CPEP16870 476 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 DCDC1P59894 354 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SREBF2Q12772 1141 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 E2F2Q14209 437 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GINS1Q14691 196 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 OCLNQ16625 522 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SYT14P1Q58G82 188 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 TYW3Q6IPR3 259 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 SYCE2Q6PIF2 218 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 PLET1Q6UQ28 207 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 NXPE4Q6UWF7 544 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ABI3BPQ7Z7G0 1075 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 PDZD3Q86UT5 571 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 MEX3DQ86XN8 651 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ZFP41Q8N8Y5 198 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 FAM181AQ8N9Y4 354 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 OR52P1PQ8NH57 321 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CYB5D2Q8WUJ1 264 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 JPH3Q8WXH2 748 aaPredicted RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ZNF354BQ96LW1 612 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 GDF15Q99988 308 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 DIMT1Q9UNQ2 313 aaKnown RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 CCL26Q9Y258 94 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 ITM2BQ9Y287 266 aa9.28□□□□□ -0.92
ZNF3-215ENST00000487620 DNMT3AQ9Y6K1 912 aaPredicted RBP9.28□□□□□ -0.92
ZNF3-215ENST00000487620 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 SLC28A2O43868 658 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 ELFN1P0C7U0 828 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 SLC2A2P11168 524 aaPredicted RBP9.27□□□□□ -0.93
ZNF3-215ENST00000487620 CHRNB1P11230 501 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 TIMP2P16035 220 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 APEX1P27695 318 aaKnown RBP9.27□□□□□ -0.93
ZNF3-215ENST00000487620 WNT4P56705 351 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 TAP2Q03519 686 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 RAB33AQ14088 237 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 SNAPC1Q16533 368 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
ZNF3-215ENST00000487620 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
ZNF3-215ENST00000487620 LCN1P1Q5VSP4 162 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms