RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 B4GAT1O43505 415 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 KIF1CO43896 1103 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 PRKRAO75569 313 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 PDE9AO76083 593 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SLITRK5O94991 958 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 NSA2O95478 260 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF682O95780 498 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 C9P02748 559 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GIMD1P0DJR0 217 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 RNH1P13489 461 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 MATN1P21941 496 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 FEN1P39748 380 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 AVPR1BP47901 424 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GABRA4P48169 554 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 DUSP3P51452 185 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 XKP51811 444 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 MVDP53602 400 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 EMP3P54852 163 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CDK6Q00534 326 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 FAM53BQ14153 422 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GNA13Q14344 377 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GRM7Q14831 915 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ADRM1Q16186 407 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 FAM214AQ32MH5 1076 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 AMZ1Q400G9 498 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SFT2D3Q587I9 215 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 NKAIN2Q5VXU1 208 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 HMBOX1Q6NT76 420 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 REEP3Q6NUK4 255 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 FAM180BQ6P0A1 224 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SLC23A3Q6PIS1 610 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 WDR74Q6RFH5 385 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ENPP6Q6UWR7 440 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CEACAM20Q6UY09 585 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ZBTB49Q6ZSB9 765 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 USP53Q70EK8 1073 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CCDC80Q76M96 950 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 KANSL1Q7Z3B3 1105 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 DGLUCYQ7Z3D6 616 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SZRD1Q7Z422 152 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 PRSS42Q7Z5A4 293 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 BMP8AQ7Z5Y6 402 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 PATL1Q86TB9 770 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GATAD2AQ86YP4 633 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ZC3H7AQ8IWR0 971 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CCDC116Q8IYX3 515 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CA13Q8N1Q1 262 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 Q8N9G6 341 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 FAM181AQ8N9Y4 354 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 NFKBIDQ8NI38 313 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SAP25Q8TEE9 199 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 KLHL6Q8WZ60 621 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 NAT6Q93015 286 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 UCN3Q969E3 161 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SDCCAG3Q96C92 435 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 CNRIP1Q96F85 164 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 NAF1Q96HR8 494 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 VPS50Q96JG6 964 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 C10orf90Q96M02 699 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF285Q96NJ3 590 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 DPYSL5Q9BPU6 564 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 TRIM4Q9C037 500 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GAREM1Q9H706 876 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 A4GALTQ9NPC4 353 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 STARD5Q9NSY2 213 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 GPATCH2Q9NW75 528 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 TRPC4Q9UBN4 977 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 DNAJB9Q9UBS3 223 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 RAB26Q9ULW5 256 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 LRCH1Q9Y2L9 728 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 MRPS2Q9Y399 296 aaKnown RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 MN1Q10571 1320 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-206ENST00000487062 PCDH15Q96QU1 1955 aa6.64□□□□□ -1.35
SF3A3-206ENST00000487062 SAC3D1A6NKF1 404 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 SGK494L7N484 410 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 TOX3O15405 576 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-206ENST00000487062 CHST10O43529 356 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 RDH16O75452 317 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 GPR75O95800 540 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 AGR2O95994 175 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 CST1P01037 141 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 FABP3P05413 133 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 IFI6P09912 130 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 SP9P0CG40 484 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 C8orf89P0DMQ9 161 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 UQCRBP14927 111 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 PORP16435 677 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-206ENST00000487062 CD1CP29017 333 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 SEPHS1P49903 392 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 CLCN2P51788 898 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 GTF2A1P52655 376 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-206ENST00000487062 MAPK10P53779 464 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 PRKAG1P54619 331 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 AQP4P55087 323 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 CASP9P55211 416 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 OLR1P78380 273 aa6.63□□□□□ -1.35
SF3A3-206ENST00000487062 SIM1P81133 766 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms