RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 KLHL6Q8WZ60 621 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 HIST1H2ACQ93077 130 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 COG8Q96MW5 612 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 RPL36Q9Y3U8 105 aaKnown RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ENPP4Q9Y6X5 453 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MPZL2O60487 215 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CBLP22681 906 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 TAS2R38P59533 333 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CLCA4Q14CN2 919 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 NDUFA9Q16795 377 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CBLL1Q75N03 491 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 Q8N9G6 341 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ZFAND2BQ8WV99 257 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SGCDQ92629 289 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 HPS1Q92902 700 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 PPP1R14BQ96C90 147 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM168Q9H0V1 697 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SERHL2Q9H4I8 314 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SERHLQ9NQF3 203 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CAB39Q9Y376 341 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 LOC285556D6RIA3 1793 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CHURC1-FNTBB4DL54 471 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SLC22A1O15245 554 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MAGEB3O15480 346 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MAOBP27338 520 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CAPZA2P47755 286 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 PRDX1Q06830 199 aaKnown RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 NFATC3Q12968 1075 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 VEZF1Q14119 521 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SHFQ7M4L6 423 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 TECPR1Q7Z6L1 1165 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 NRROSQ86YC3 692 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 FAM217AQ8IXS0 508 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MAPKAP1Q9BPZ7 522 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 POLE4Q9NR33 117 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ANK1P16157 1881 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ANTXRLA6NF34 631 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 VILLO15195 856 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 CBFA2T3O75081 653 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 CRISP1P54107 249 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SHC2P98077 582 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 FCHO2Q0JRZ9 810 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 MAP4K2Q12851 820 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 MRPL28Q13084 256 aaKnown RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 IL18R1Q13478 541 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 FIGLAQ6QHK4 219 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 Q6ZSR6 202 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 MSANTD1Q6ZTZ1 278 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 USP53Q70EK8 1073 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 NATD1Q8N6N6 113 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 OR8J2Q8NGG1 315 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 OR51A7Q8NH64 312 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 OR5K2Q8NHB8 316 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF675Q8TD23 568 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ZDHHC5Q9C0B5 715 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SPNS1Q9H2V7 528 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 NMNAT1Q9HAN9 279 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM45AQ9NWC5 275 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF624Q9P2J8 865 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 NPIPA5A0A0B4J1W7 369 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 C1orf226A1L170 272 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 NPIPA7E9PJI5 369 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 LINC01565O15544 149 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 NPIPA8P0DM63 369 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 RHCEP18577 417 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 GABRA3P34903 492 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SLC14A1Q13336 389 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 KLHDC8BQ8IXV7 354 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 COX4I2Q96KJ9 171 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 BARD1Q99728 777 aaKnown RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 HCN3Q9P1Z3 774 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 PPM1DO15297 605 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ASNA1O43681 348 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 LDB3O75112 727 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SEMA4FO95754 770 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 JUNDP17535 347 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 CRHBPP24387 322 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ACADLP28330 430 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 GPR4P46093 362 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 DAPP51397 102 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 RTL4Q6ZR62 310 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 FAM92BQ6ZTR7 304 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 TSPYL5Q86VY4 417 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 SAMD14Q8IZD0 417 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-216ENST00000486741 METTL4Q8N3J2 472 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms