RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 KLHL29Q96CT2 875 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 CNRIP1Q96F85 164 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PTCHD1Q96NR3 888 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 CCNL2Q96S94 520 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 MESP1Q9BRJ9 268 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 TRIM4Q9C037 500 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 SLAMF7Q9NQ25 335 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 SLC35C2Q9NQQ7 365 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 C14orf105Q9NVL8 296 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 WDR70Q9NW82 654 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PSME2Q9UL46 239 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PTRH2Q9Y3E5 179 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 MMACHCQ9Y4U1 282 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 SPTA1P02549 2419 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 IGKV3D-11A0A0A0MRZ8 115 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 BLACEA4D250 179 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 CAPN14A8MX76 684 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 MYO1GB0I1T2 1018 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 IDSB3KWA1 339 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 NR5A2O00482 541 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 SCN2BO60939 215 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 DCTN3O75935 186 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 LIPCP11150 499 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 WT1P19544 449 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 PTPN4P29074 926 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 PPP2R1BP30154 601 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 ADSLP30566 484 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 S100A3P33764 101 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 PTGER1P34995 402 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 RPL3P39023 403 aaKnown RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 IGLV3-21P80748 117 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 SRSF11Q05519 484 aaKnown RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 FAM174BQ3ZCQ3 159 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 DGAT2L6Q6ZPD8 337 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC116Q8IYX3 515 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 IL22RA1Q8N6P7 574 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 OR8J2Q8NGG1 315 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 OR2Y1Q8NGV0 311 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 DOK4Q8TEW6 326 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 VPS33AQ96AX1 596 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 PPWD1Q96BP3 646 aaKnown RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF764Q96H86 408 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 LRRC37BQ96QE4 947 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 CRB3Q9BUF7 120 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 DUSP26Q9BV47 211 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 ALOXE3Q9BYJ1 711 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 BHLHE41Q9C0J9 482 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 TMEM45AQ9NWC5 275 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 IL17BQ9UHF5 180 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 C3orf18Q9UK00 162 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 MAPRE3Q9UPY8 281 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 ERVK-11Q9UQG0 969 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 MRPS18BQ9Y676 258 aaKnown RBP11.97□□□□□ -0.49
HDAC6-229ENST00000486665 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
HDAC6-229ENST00000486665 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 LOC100653049A0A140TA62 436 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 ASPDHA6ND91 283 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 C21orf140B9A014 251 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 SLC22A2O15244 555 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 ALOX12BO75342 701 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 KRT34O76011 436 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 IL6P05231 212 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 PGRP06401 933 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 SNRPB2P08579 225 aaKnown RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 CD63P08962 238 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 PORP16435 677 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 CSNK2A2P19784 350 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 CAPN3P20807 821 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 KIR3DL1P43629 444 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 RPS15P62841 145 aaKnown RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 STX4Q12846 297 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 NFATC3Q12968 1075 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 TLR1Q15399 786 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 TERF2Q15554 542 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 NSDHLQ15738 373 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 CEBPEQ15744 281 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 VPS26BQ4G0F5 336 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 TIGD2Q4W5G0 525 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 LANCL3Q6ZV70 420 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 VASH2Q86V25 355 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 POU5F2Q8N7G0 328 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 AMER2Q8N7J2 671 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 SUN3Q8TAQ9 357 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 STARD8Q92502 1023 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 EXTL1Q92935 676 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 ERP27Q96DN0 273 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 SPDL1Q96EA4 605 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 BBS4Q96RK4 519 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 GPR87Q9BY21 358 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 GLIPR2Q9H4G4 154 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 ARL8BQ9NVJ2 186 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 NXT1Q9UKK6 140 aaKnown RBP11.96□□□□□ -0.49
HDAC6-229ENST00000486665 TCFL5Q9UL49 500 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF780BQ9Y6R6 833 aa11.96□□□□□ -0.49
HDAC6-229ENST00000486665 SCN2AQ99250 2005 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms