RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 DDX39BQ13838 428 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 PUM1Q14671 1186 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 DUSP28Q4G0W2 176 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 CRB2Q5IJ48 1285 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MZT2AQ6P582 158 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 B3GLCTQ6Y288 498 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 USP45Q70EL2 814 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MOB2Q70IA6 237 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 LRRC70Q7Z2Q7 622 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 UFD1Q92890 307 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 SGTBQ96EQ0 304 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 OTUB1Q96FW1 271 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 TMEM175Q9BSA9 504 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MAGEH1Q9H213 219 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ELP3Q9H9T3 547 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 C1GALT1Q9NS00 363 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 LYARQ9NX58 379 aaKnown RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 MARCH2Q9P0N8 246 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF282Q9UDV7 671 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-208ENST00000486641 ATPIF1Q9UII2 106 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 RAB23Q9ULC3 237 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 PIKFYVEQ9Y2I7 2098 aa10.12□□□□□ -0.79
CCDC171-208ENST00000486641 CCDC88CQ9P219 2028 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TRPM7Q96QT4 1865 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TRDV1A0A1B0GX56 115 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SERTM1A2A2V5 107 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 KDELR3O43731 214 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 NR2F6P10588 404 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 GRK4P32298 578 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 NUP62P37198 522 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 OPRD1P41143 372 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SRP9P49458 86 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TPMTP51580 245 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 GAS1P54826 345 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CCL23P55773 120 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 C21orf58P58505 322 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 DCDC1P59894 354 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 HBA1P69905 142 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 RAE1P78406 368 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CDK6Q00534 326 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 EEF1A2Q05639 463 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CHIT1Q13231 466 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ELOAQ14241 798 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ARHGAP15Q53QZ3 475 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SYT14P1Q58G82 188 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 C10orf120Q5SQS8 335 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ANXA8L1Q5VT79 327 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CD200R1LQ6Q8B3 271 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TFAP2EQ6VUC0 442 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 OR4K1Q8NGD4 311 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 OR8D4Q8NGM9 314 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 POF1BQ8WVV4 589 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 HSD17B8Q92506 261 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 HGDQ93099 445 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 FUBP3Q96I24 572 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 RNF32Q9H0A6 362 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 WASH6PQ9NQA3 447 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 DLL4Q9NR61 685 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ZSCAN32Q9NX65 697 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TRPM5Q9NZQ8 1165 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ACSL6Q9UKU0 697 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 PPIEQ9UNP9 301 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 RUVBL1Q9Y265 456 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ASB4Q9Y574 426 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CSNK1G3Q9Y6M4 447 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CHD5Q8TDI0 1954 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TEX13CA0A0J9YWL9 993 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 A0A1B0GVC2 190 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 MFSD2BA6NFX1 497 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 A6NIN4 97 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 M0QZQ0 153 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 OR10H3O60404 316 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 IFNW1P05000 195 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CD22P20273 847 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 AHCYP23526 432 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SLC6A4P31645 630 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SOX18P35713 384 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 CHI3L1P36222 383 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 VSX2P58304 361 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ACSM2AQ08AH3 577 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TWF1Q12792 350 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 DSG2Q14126 1118 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 NTRK2Q16620 822 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF385BQ569K4 471 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SPRYD7Q5W111 196 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ACSM2BQ68CK6 577 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 UBE2R2Q712K3 238 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 FAM26EQ8N5C1 309 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 RFT1Q96AA3 541 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 LRR1Q96L50 414 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 COQ10AQ96MF6 247 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF582Q96NG8 517 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TMED9Q9BVK6 235 aa10.11□□□□□ -0.79
CCDC171-208ENST00000486641 POLR2J3Q9H1A7 115 aaKnown RBP10.11□□□□□ -0.79
CCDC171-208ENST00000486641 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms