RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 IFNA7P01567 189 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 SLC2A2P11168 524 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ETFAP13804 333 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 RBMS1P29558 406 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 NR4A2P43354 598 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 PLGLB1Q02325 96 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ENPP6Q6UWR7 440 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ASPGQ86U10 573 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 JAZF1Q86VZ6 243 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ZSCAN1Q8NBB4 408 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 OR4K14Q8NGD5 310 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 OR8K5Q8NH50 307 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 C11orf24Q96F05 449 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 INPP5KQ9BT40 448 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 CCDC32Q9BV29 185 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 CDADC1Q9BWV3 514 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 UCK2Q9BZX2 261 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 CLEC4EQ9ULY5 219 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 GPR45Q9Y5Y3 372 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 POLR2AP24928 1970 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ZSCAN5BA6NJL1 495 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 TLR4O00206 839 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 SCAMP2O15127 329 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 MMP2P08253 660 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 GIMD1P0DJR0 217 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 KCNC4Q03721 635 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 USP53Q70EK8 1073 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF551Q7Z340 670 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 OR13F1Q8NGS4 319 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 DOK4Q8TEW6 326 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ASB11Q8WXH4 323 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 GPRC5BQ9NZH0 403 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 RPL36Q9Y3U8 105 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 LOXHD1Q8IVV2 1947 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 DLGAP1O14490 977 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ALDOCP09972 364 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ZDHHC11BP0C7U3 371 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 GJA4P35212 333 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 FADDQ13158 208 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 TUBB3Q13509 450 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 C6orf120Q7Z4R8 191 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 LILRB4Q8NHJ6 448 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 SNX33Q8WV41 574 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 PDLIM5Q96HC4 596 aaKnown RBP10.52□□□□□ -0.73
HDAC6-228ENST00000486227 ACPTQ9BZG2 426 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 VAPAQ9P0L0 249 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 HCN4Q9Y3Q4 1203 aa10.52□□□□□ -0.73
HDAC6-228ENST00000486227 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 KCNJ13O60928 360 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CH25HO95992 272 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 SDC1P18827 310 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 PTNP21246 168 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 RCAN2Q14206 197 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 SGCBQ16585 318 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 NDUFAF6Q330K2 333 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CRTC2Q53ET0 693 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 GHDCQ8N2G8 530 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 RASGEF1AQ8N9B8 481 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 LMNTD1Q8N9Z9 388 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 OR10H4Q8NGA5 316 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM125Q96AQ2 219 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 NTMT1Q9BV86 223 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 COMMD3Q9UBI1 195 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 KLF15Q9UIH9 416 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 NUDT1P36639 197 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 GRK6P43250 576 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TNFRSF4P43489 277 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 LYSMD4Q5XG99 296 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 VTCN1Q7Z7D3 282 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 NRROSQ86YC3 692 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 MFSD6LQ8IWD5 586 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 SLC22A15Q8IZD6 547 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 DTWD1Q8N5C7 304 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 C16orf78Q8WTQ4 265 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 MAL2Q969L2 176 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 EGLN2Q96KS0 407 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 KCTD7Q96MP8 289 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TGM7Q96PF1 710 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 DOHHQ9BU89 302 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TTYH1Q9H313 450 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TBC1D17Q9HA65 648 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 PRAMEF26H0Y7S4 382 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 PLOD2O00469 737 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 B4GAT1O43505 415 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CDC123O75794 336 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 FUT4P22083 530 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CRHBPP24387 322 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 ACADLP28330 430 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CLDN2P57739 230 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 MRPS21P82921 87 aaKnown RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 CSTF1Q05048 431 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms